Vibrio alginolyticus: N646_4266
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Entry
N646_4266 CDS
T02840
Name
(GenBank) GGDEF family protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vag
Vibrio alginolyticus
Pathway
vag05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
N646_4266
Enzymes [BR:
vag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
N646_4266
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
Ribosomal_L5e
GvpL_GvpF
Motif
Other DBs
NCBI-ProteinID:
AGV20075
UniProt:
A0A2I3CRT1
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All DBs
Position
2:complement(1302246..1304159)
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AA seq
637 aa
AA seq
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MGRLQTLDYEIPESMRRSWQEIVNLLAQITHVPTTLIMRIHPDRIEVNTSSETLGNPYRT
GDAEQLGNGLYCEQVIEQKGELVIPNALEDEEWQNNPDIKLGMISYCGLPLFWPNGESFG
TICMLDSERNEYNDSYRQLLETFKDSIEAQLSVVYQQHKLQRLNTELKSRIENRTTDLAQ
LSYSLTQEIDRRKAAEKQVSYQKTHDQGTGFLNRSALENIVQYTLQSLDSDQQSLVVINI
GFSNARSIQTRHGFEVFDNILKEFHSRLTRHGASGFITGRPSSNDMVLLIWGEDIEARLN
QLLDDITKISVDGFVFNKTEIHLHTYIGIVQAYKDCSNAKRILQHACYAMLLCKESGEPF
SYFRENHSADLNSHNELESYLLQAVRNDDLVLYFQPQVDSKTRKWIGAEALLRWRHPILG
DVSNEALIHMAEQNGLIFEVGSFVLRTAIDKAKQWSELIDNFKIAVNVSPIQLQNVNFAE
QVQHLLDTFHLPAHFLELEVTESALIADEIVARTTLNKLHKLGVTLSLDDFGTGYASFSY
LKKYPFDAIKIDKSFVQQMEKSDDDREIICSIIHIAKKLELQVVIEGIESHQQEQFLIGE
GCDIGQGFLYGKPMPCNEFEQSLFNQRLSGGQYAYSS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggggagattgcaaacattagactacgaaatccctgagtctatgcgaagaagttggcaa
gaaatcgtcaacttactggctcaaataacacacgtacccaccacattaattatgcgtatc
catccggatcgcatagaagtaaatacatctagcgaaactctaggtaatccttatcgtact
ggcgatgcagagcagcttggtaacggtttgtattgcgagcaagttatagaacagaaaggc
gagcttgtaatccccaatgcgcttgaagatgaagaatggcaaaataacccagacatcaaa
ctaggcatgatttcttattgcggcttaccgctattctggccaaatggggagtcatttgga
acaatctgtatgcttgactctgagagaaacgagtacaacgatagttaccgtcagttgctt
gaaactttcaaagattcaatcgaagcacagctttcagttgtgtaccaacaacataaactt
cagcgacttaacaccgagctaaagagtcgaattgaaaatcgtaccacggatttagcccag
ttaagttactccttaacacaagaaattgatcgccgtaaagccgcggaaaaacaagtgagc
taccaaaaaacacatgatcagggaactggatttctaaatcgttctgcacttgagaacatt
gtccaatacaccttacagtcccttgatagtgatcagcaatcgcttgtggtcatcaacatt
ggttttagtaacgctcgcagtattcagaccaggcacgggttcgaggtctttgacaacatt
ttaaaagaatttcactccagattaaccagacacggtgctagcggatttatcactggtaga
ccaagttcgaatgacatggttttattgatttggggagaggatattgaagctcggttaaat
caactattagatgatatcactaaaattagcgtagatggatttgtcttcaacaaaacagaa
atacatttgcacacgtatatcggtatagttcaagcttacaaagattgcagcaatgctaag
cgtatccttcaacatgcatgttacgcgatgcttctatgtaaagaatccggcgaacctttt
agttattttagagaaaatcattcggcggatctcaatagtcacaatgaactggaaagttac
cttttacaagcagtgcgtaacgacgatttagtgttgtactttcaacctcaagtagactcc
aaaacacgtaaatggattggcgcagaagccttgcttcgttggagacatccaatacttggc
gacgtttccaacgaagcattgatacatatggccgaacaaaacgggcttatctttgaagtt
ggctcttttgttctgcgtaccgcgatagacaaagcgaaacaatggtctgagttaatcgat
aacttcaaaattgccgtcaacgtttctcccattcaattacaaaacgtaaattttgcagaa
caagtgcaacacctactcgacactttccatttgccagcacactttctcgaactcgaagta
accgagagcgctctaattgctgatgaaatagtagcacgcacaacgttaaataagttgcat
aaactaggtgtgacattgtcacttgatgattttggtacaggatatgcttcgttcagctat
ttaaagaaatatccgtttgatgccatcaaaattgataaaagcttcgtccagcaaatggaa
aagtcagatgatgatcgcgagatcatttgttcaatcatacacattgcaaaaaaactggaa
ctccaagtagtgatcgagggcattgaatcccaccaacaagagcagtttcttattggtgag
ggttgtgatatcggacaaggttttctttatggtaaacctatgccttgtaatgaatttgag
caaagtttgtttaatcaacgcctttctggcgggcaatacgcctactcttcctaa
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