Vagococcus coleopterorum: G7081_01385
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Entry
G7081_01385 CDS
T06513
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
vah
Vagococcus coleopterorum
Pathway
vah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G7081_01385 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vah03021
]
G7081_01385 (rpoB)
03400 DNA repair and recombination proteins [BR:
vah03400
]
G7081_01385 (rpoB)
Enzymes [BR:
vah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G7081_01385 (rpoB)
Transcription machinery [BR:
vah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G7081_01385 (rpoB)
DNA repair and recombination proteins [BR:
vah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G7081_01385 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QIL45835
UniProt:
A0A6G8ALM8
LinkDB
All DBs
Position
complement(284862..288452)
Genome browser
AA seq
1196 aa
AA seq
DB search
MKTLAGHVVKYGKHRERRSYARINEVLELPNLIEIQTDSYQWFLDKGLKEMFEDILPIKD
FSDKLALEFVGYELKEPKYTVEEARAHDANYSAPIHVTLRLDNKTTGEIKSQEVFFGDFP
LMTEMGTFIINGAERVIVSQLVRSPGVYFNGKTDKNGRESFGTTVIPNRGAWLEMETDAK
NISYVRIDRTRKIPLSVLVRALGFGSDDTILEIFGENESLRLTLEKDIHKNASDSRTEEG
LKDIYDRLRPGEPKTADSSRNLLNARFFDPKRYDLAAVGRYKVNKKLSLKTRLLNQTLGE
TLVDPETGEILFEKGTVINHDVMDELGKHLDAGLNNETYYPTEDAVVTEPMTIQTIKVLS
PKDPERVINVIGNGQIEADNKTIVPADVIASMSYFFNLQEDIGNVDDIDHLGNRRIRSVG
ELLQNQFRIGLARMERVVRERMSIQDTETLTPQQLINIRPVVASIKEFFGSSQLSQFMDQ
TNPLGELSHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINNLSS
FAKINEYGFIETPYRRVDRKTGVVTETIDYLTADEEDHYMVAQANSKLNEDGTFKNDVVM
ARIQSENLEVSTDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIQP
RSPFVGTGMEYKAAHDSGSALVAKHDGVVEFVDATEIRIRRSNGTLDKYSLTKFNRSNAG
MCYNQRPIVTLGEKVDKSDILADGPSMEEGEMALGQNVLVAFMTWEGYNYEDAIIMSRRL
VKDDVYTSIHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDEMGIIRIGAEVHDGDL
LVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGDGIVHDVKIFTREAGDEL
APGVNMLVRVYIVQKRKIKEGDKMAGRHGNKGVVSRIMPEEDMPFMPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMAARQLGIHVATPVFDGADEEDVWSTVREAGMAKDAKTILYDGR
TGEPFDNRLSVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLD
MQVLDIDDQPIELRDMDDEEDGLITVDALTKYAQEQAAKTAQAEADAEAKAQETQD
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
gtgaagactttggctggacacgtagtaaaatacggaaaacatcgcgaaagaagaagttat
gcgcgaatcaatgaagtgttagaattaccaaacttgatcgaaattcaaacagattcttat
cagtggttccttgataaagggctgaaagaaatgttcgaagatatcttaccgatcaaagac
tttagcgacaaattagctttagagtttgttggctatgaattaaaagaacctaaatacacg
gtagaagaggctcgtgcacacgatgctaactactcagcgccaatccacgtaacgttacgt
ttggataataagacaactggcgaaatcaaatctcaagaagtattcttcggagatttccca
cttatgactgaaatgggtacatttatcattaacggggcagaacgtgttatcgtttctcaa
ttagttcgttctcctggtgtttactttaacggtaaaactgataaaaacggtcgcgaaagt
tttggcacaactgtgatccctaaccgtggtgcatggttagaaatggaaacagatgcgaaa
aacatttcatacgtacgtattgaccgtactcgtaaaattccattatctgtcttagttcgt
gctttagggttcggatcagatgatacgattttagaaatctttggtgaaaacgaaagctta
cgtttaacacttgaaaaagatatccacaaaaatgcttcagactcacgtactgaggaaggg
ttgaaagacatctacgatcgtctacgccctggtgagccgaaaacagcagacagttcacgt
aacttgttaaatgctcgtttcttcgatccaaaacgttatgacttagcagctgttggtcgt
tacaaagtcaacaaaaaattaagtcttaaaacacgtttgttaaaccaaactttaggtgaa
acgttagttgaccctgaaactggtgaaattttattcgaaaaaggcactgtcatcaaccat
gatgtgatggatgaattaggcaaacatttagatgctgggttaaacaatgaaacttactac
ccaactgaagatgctgtcgtgacagaaccaatgacaattcaaacaatcaaagttctttct
ccgaaagatcctgagcgtgtgattaacgttatcggtaatggtcaaatcgaagcagataac
aaaacaatcgttccagctgacgtgattgcttcaatgagttatttctttaacttacaagaa
gacatcggtaacgttgacgatatcgaccacttaggtaaccgtcgtattcgttcagttggt
gagttattacaaaaccaattccgtattggtttagctcgtatggaacgtgtggttcgtgaa
agaatgtctatccaagacactgaaacgttaacaccacaacaattaatcaacatccgtcca
gttgttgcgtcaatcaaagaattctttggttcgtctcaattgtcacaattcatggaccaa
actaacccactgggtgagttgagtcataaacgtcgtctatcagccttagggcctggtggt
ttaactcgtgaccgtgctggttatgaagttcgtgacgtacattactctcactatggtcgt
atgtgtccgattgaaacgcctgagggtccaaatatcggtctgatcaataacttatcaagt
ttcgcgaaaattaacgaatatggtttcattgaaacgccataccgtcgtgttgatcgcaaa
acaggtgttgtaacggaaacaatcgattacttaaccgctgatgaagaagatcactacatg
gttgcgcaagcaaactcaaaattaaacgaagacggtacattcaaaaatgatgttgttatg
gcccgtatccaaagtgaaaaccttgaagtttcaactgataaagttgactacatggacgtt
tcacctaaacaagtagttgcggtagcgacagcgtgtattcctttcttggaaaacgatgac
tcaaatcgtgccttgatgggtgccaacatgcaacgtcaagctgtgccacttatccaacct
cgttcaccattcgtgggaactggtatggaatacaaagcagcacacgattcaggttcggct
ttagtagctaaacatgatggtgttgttgaattcgtagatgcgactgaaattcgtattcgt
cgttcaaacggaacattagataaatattcattaactaaattcaatcgttctaatgcgggt
atgtgttataaccaacgtccaatcgtgactctaggtgaaaaagttgataagagcgacatc
ttagcagatggcccatcaatggaagaaggcgaaatggctttaggtcaaaacgtcttagtt
gccttcatgacttgggaaggttacaactacgaggatgcgatcattatgagtcgtcgtctg
gttaaagatgatgtgtatacatctatccatattgaagaatatgaatcagaagctcgtgat
acaaaattaggacctgaagaaattactcgtgaaattccaaacgttggtgaagatgctctg
aaagatttagatgagatgggtatcatccgcattggtgcggaagttcatgatggtgattta
ttagttggtaaagtgactcctaaaggggtaacagaattatcagctgaagaacgtctatta
catgcaatctttggtgaaaaagctcgtgaagttcgtgatacttctctacgtgtaccacac
ggtggtgacggtatcgttcacgatgttaagatctttactcgtgaagcgggtgacgaatta
gcaccaggcgtaaacatgttagtacgtgtttacatcgtgcaaaaacgtaagatcaaagaa
ggtgacaagatggccggacgtcacggtaataaaggggttgtctcacgcattatgcctgag
gaagacatgccatttatgccagacggtacgccagtcgacatcatgcttaacccattaggg
gttccttctcgtatgaatatcgggcaagtacttgagttacacttaggtatggctgctcgt
caattaggtatccacgtcgctacaccagtatttgatggagcggacgaggaagacgtatgg
tcaacagttcgtgaagctggtatggcgaaagacgctaagactatcctttatgatggtcgt
actggtgaaccatttgataaccgtctatctgttggtgtgatgtacatgctgaaattagcc
cacatggttgatgacaaattacatgcacgttcaacaggtccttactcattagtgacacaa
caaccattgggtggtaaagctcaatttggtggacaacgtttcggtgagatggaagtttgg
gcacttgaagcttacggtgctgcttacacattacaagaaatcttaacgtacaaatcagat
gacgttgttggtcgtgttaaaacttacgaagcaatcgttaaaggtgaaccaattccaaaa
ccaggcgtgccagaatcattccgcgtattggtgaaagaattacaatcattaggtttagat
atgcaagtactagatattgatgatcaaccgattgaattgcgcgatatggacgatgaggaa
gatggtttaattaccgttgatgccttaactaaatacgctcaagaacaagcagcaaaaaca
gctcaagctgaagcagatgctgaagcaaaagctcaagaaactcaagattaa
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