KEGG   Vagococcus coleopterorum: G7081_02485
Entry
G7081_02485       CDS       T06513                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vah  Vagococcus coleopterorum
Pathway
vah03030  DNA replication
vah03430  Mismatch repair
vah03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G7081_02485
   03430 Mismatch repair
    G7081_02485
   03440 Homologous recombination
    G7081_02485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vah03032]
    G7081_02485
   03400 DNA repair and recombination proteins [BR:vah03400]
    G7081_02485
Enzymes [BR:vah01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G7081_02485
DNA replication proteins [BR:vah03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     G7081_02485
DNA repair and recombination proteins [BR:vah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     G7081_02485
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1 XdhC_C
Other DBs
NCBI-ProteinID: QIL46035
UniProt: A0A6G8AM78
LinkDB
Position
complement(493730..494263)
AA seq 177 aa
MNFIAFDFETANAEKHSACSIALVMVQNSQIVGHYYTLIRPETDFHWRNVQVHGITQEDV
INAPRFPEVWSEISQYFQDARLLVAHNAAFDINVLKGCLSYYGLDQPHYMSLCTVRTSKK
LLPHFENHKLNTVSRNLGIHLENHHHALDDSIACASILLKQEQIFGVEPLKQLVKYI
NT seq 534 nt   +upstreamnt  +downstreamnt
atgaattttattgcttttgattttgaaacagccaatgctgagaaacatagtgcctgttca
attgccttagtcatggtacaaaatagtcaaattgtcgggcattattatactttaatacgc
ccagaaacagacttccattggagaaatgtccaagttcacggcatcacacaagaagatgtt
attaacgctccaaggtttccagaagtctggtcagaaattagtcagtattttcaagatgcc
cgattacttgttgcacataatgcagcatttgatattaatgttttgaaaggatgcttatct
tactatggattagatcaacctcattatatgtcactgtgtactgtgagaactagcaaaaaa
ttgttacctcatttcgaaaatcataaactaaatacagtctcacgtaatcttggtatccat
ttagaaaaccatcaccatgctcttgatgatagcattgcttgtgcttctattttgttaaag
caagaacaaatatttggtgttgaacctctcaaacaattagttaaatacatataa

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