Vagococcus coleopterorum: G7081_03125
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Entry
G7081_03125 CDS
T06513
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
vah
Vagococcus coleopterorum
Pathway
vah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7081_03125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vah03019
]
G7081_03125
03009 Ribosome biogenesis [BR:
vah03009
]
G7081_03125
Enzymes [BR:
vah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G7081_03125
Messenger RNA biogenesis [BR:
vah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7081_03125
Ribosome biogenesis [BR:
vah03009
]
Prokaryotic type
rRNA helicases
G7081_03125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QIL46132
UniProt:
A0A6G8AMF4
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All DBs
Position
605160..606791
Genome browser
AA seq
543 aa
AA seq
DB search
MKFEELGLQPELLAAIQRAGFEEATPVQGGTIPIALTGQDVIGQAQTGTGKTAAFGLPML
QKIDPSKRVVQGLVIAPTRELAIQTQEELFRLGKDKKIRVQAVYGGADIGRQIRGLKDGA
HIVVGTPGRLIDHINRKTLKLETVETLVLDEADEMLNMGFLEDIESIISKVPAARQTLLF
SATMPDAIKRIGVKFMNNPEHVAIKNKEMTANLIDQYYVRCKDFEKFDIMTRLLDVQSPE
LTIVFGRTKRRVDELARGLELRGYKAEGIHGDLSQQKRMSVLRAFKGGQLDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGLSVTFVTPNEMSYLNVIENLTKK
KMTPLRPPSQKEAMTSQIGAAVETIESEFEDANLEDYSAATADLVAKYSAEELAAMLIKS
VAKESSSEVPVKITPERPLPGGKGRGGNRGGGSRGGNRGGGGYRGGNRNGGGNRGGRGER
SDRNDRGGRGNSEGRNNDRRRSFDKKDGKPSQSRRSESRRSESENTGKSKGGKRDFVIRT
GNK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttgaagaattaggactacaacctgaattactagccgctattcaacgtgccggc
tttgaagaggcaacacctgtacaagggggaactatcccaatcgccttaactggtcaagac
gttatcggccaagcacaaacaggtactggtaaaactgcagcttttggtttaccaatgtta
caaaaaattgacccaagcaaacgcgtggttcaaggattagtgattgcgccaactcgtgag
ttagcaatccaaacacaagaagaattattccgtctaggaaaagataaaaaaatccgcgtt
caagcggtttatggtggagcggatatcggtcgtcaaattcgtggactaaaagatggggct
catattgttgtgggtacacctggtcgtttaatcgatcatattaatcgtaaaacgttgaaa
cttgaaacagttgaaacattagtattagatgaagcagatgaaatgttaaacatgggattc
ttagaagatattgaatcaattatttctaaagtgccggctgcaagacaaacattattattc
tctgcaacaatgccagatgctatcaaacgtattggtgttaaatttatgaataatccagaa
cacgtagcaatcaagaacaaagaaatgactgcgaacttaattgaccaatattatgtacgt
tgtaaagatttcgaaaaattcgatattatgacacgtttattagatgttcagtcaccagaa
ttaactatcgtattcggacgtacaaaacgtcgtgttgatgaattagcacgtggtttagag
ttgcgtggttataaagctgagggaatccatggtgatttatctcaacaaaaacgtatgagc
gtattgcgcgcattcaaaggtggtcaactagacatcttggtagcgacagacgttgctgca
cgtggtttagatatttctggcgtgactcacgtttataactacgatattcctcaagatcca
gaaagttacgttcaccgtattggacgtactggtcgtgctggtaaagaaggtttatctgtg
acttttgttacaccaaatgaaatgagttacttaaacgtaattgaaaacttaacgaagaaa
aaaatgacaccattacgtccgccttcacaaaaagaagcgatgacgagccaaattggggct
gcggttgaaacgattgaaagcgaatttgaagatgctaatttagaggactattcagctgca
acagctgacttagtagctaaatattcagctgaagagttagcagcgatgttgattaagtca
gttgccaaagaaagttcatcagaagttccagttaaaatcactccggaacgtccattacct
ggaggtaaaggacgtggtggaaaccgtggcggcggaagtcgtggcggaaatcgtggtggc
ggaggctaccgtggcggaaatcgcaatggtggtggaaaccgtggtggacgtggcgaacgt
agtgatcgtaacgatcgcggaggtcgtggtaacagcgaaggccgcaacaatgatcgtcgc
cgtagttttgataaaaaagatggtaaaccaagtcaaagccgtcgttcagaatctcgtcgt
tcagagtctgaaaatactggtaaatctaaaggtggaaaacgtgatttcgttatccgcaca
gggaataaataa
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