Vagococcus coleopterorum: G7081_04110
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Entry
G7081_04110 CDS
T06513
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
vah
Vagococcus coleopterorum
Pathway
vah03030
DNA replication
vah03430
Mismatch repair
vah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7081_04110 (holA)
03430 Mismatch repair
G7081_04110 (holA)
03440 Homologous recombination
G7081_04110 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vah03032
]
G7081_04110 (holA)
03400 DNA repair and recombination proteins [BR:
vah03400
]
G7081_04110 (holA)
Enzymes [BR:
vah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G7081_04110 (holA)
DNA replication proteins [BR:
vah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G7081_04110 (holA)
DNA repair and recombination proteins [BR:
vah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G7081_04110 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
DNA_pol3_gamma3
RE_MjaI
DUF7375
Motif
Other DBs
NCBI-ProteinID:
QIL46310
UniProt:
A0A6G8AMW1
LinkDB
All DBs
Position
827896..828921
Genome browser
AA seq
341 aa
AA seq
DB search
MSLQETIKKVNSGQLASVYLVLGTEQFLADRFKQALQKQIILTEDDELNSASFDMAESLL
GAVIDEANTIPFFGDKRLVAIENPYFLTGEKKKIALEHNTDELIAYLEEPSDSTVLVFYA
PYEKLDERKKVVKQLKKVATLVDVKEMQENDVRKYVQQYIHNEGYEITPEAFDLFVHLTD
MDLSKIMSELNKVMLYSSDTKKITKPMIADLVPKTLEHNIFDMVNYVTKGQAEDALSLYR
DLLLQGEETIKINAILIGQFRLLLQVKIMQGAGYQQSNMQDVIKVHPYRLKMAQQQARGF
DEVTLKAMFQDLVENDYRIKTGALEKDLLFELFLLKHGNRK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgcaagaaacgataaaaaaagtaaatagtggtcagttagcaagtgtctatctt
gtattagggacagaacagtttttagcagatcgttttaaacaagcgttgcagaagcaaatc
attttaacagaagatgatgagctaaactcagcaagttttgatatggctgaaagtttactg
ggagcagtcattgatgaagctaatacgattcctttttttggtgacaaacgtttagtggca
attgaaaatccctattttttaacaggtgaaaagaaaaaaatagcacttgagcataataca
gatgaactgattgcttatttagaagagccgtcagattcaacagtcctagttttttatgca
ccgtatgaaaaattggatgaacgtaaaaaagttgtaaagcaattgaagaaggttgcaact
ttggttgatgttaaagagatgcaagagaacgatgtcagaaaatatgtgcaacaatatatt
cataatgagggctatgagattacaccagaagcctttgatttatttgttcatttaactgat
atggatttatcgaagatcatgtctgagttaaataaagttatgctgtatagttcggacaca
aaaaaaataaccaaaccaatgattgcagatttagtgccgaaaacactagaacataatatc
tttgatatggtcaattatgtgactaaagggcaagctgaagatgcgctaagtttatatcgc
gacttgttgttgcaaggggaggaaacgattaaaattaatgcgattttaattggtcagttc
cgcttgttgttacaagtcaagattatgcaaggggcgggttatcagcaaagtaatatgcaa
gatgtcattaaagtacatccttatcgtttgaagatggcacaacaacaagctcgtgggttt
gatgaagtgaccttgaaagcgatgttccaagatttagttgagaatgattaccgtattaaa
acaggagctttagaaaaagatttgttatttgaattattcctattaaagcacgggaaccgc
aaataa
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