Vagococcus coleopterorum: G7081_05975
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Entry
G7081_05975 CDS
T06513
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
vah
Vagococcus coleopterorum
Brite
KEGG Orthology (KO) [BR:
vah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vah03400
]
G7081_05975 (addA)
Enzymes [BR:
vah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7081_05975 (addA)
DNA repair and recombination proteins [BR:
vah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G7081_05975 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_30
ResIII
GED
Motif
Other DBs
NCBI-ProteinID:
QIL46655
UniProt:
A0A6G8AP00
LinkDB
All DBs
Position
complement(1204402..1208181)
Genome browser
AA seq
1259 aa
AA seq
DB search
MLNQQKETLGGIPLKPDNSHFTDGQWQAIYDAGDNILVSASAGSGKTTVLVQRVIEKIKS
GTNVDELLIVTYTEAAAKEMKGRIQAAVQSAITDESNQELKRHLVEQLSLIPTAHVSTLH
AFCLQVIRKYYYLINIDPVFRLLTDETEMILLKEDVWDKVRNDLYADQQEAFYQLTENFS
NDRNDDGLTKLIFALYDFARANPDPQAWLESLGKAYKSSGKMADLGIYQEILKPKILLEA
EQLVVQGQEMVRLSEGEETLQKPFECVSEELPVYQQLQTLLLADDLEAVYSLINEGVVTK
RYPGLRNLEPEEKAINEQIKQLRTSNKDIIKNWQEGIFSLEPSVMLTVMKESQELVDYMA
GVASQFDMAYRARKEELNLVDFNDLEHFTLQILAELKDGEWQGTEASNYYRSLFKEVLVD
EYQDINQLQESILFWLRQPTSGSGNLFMVGDVKQSIYSFRLADPTLFINKYNKFGEGEDG
RRIILAENFRSRGEVLDFTNLVFQQLMDPKLGQLAYDLPAQLVTGFTGYPENDQFKPEVL
IFESQTDDTEQDVLDVDDSFQIDDKTEGELRLVGNKIKELFQQEFPIYDKKTRETRPIKY
SDIVLLSPTKKNNLVLLDIFKELGIPLQVNDTQNYFQATEIKIMMALLNVIDNPYQDIPL
AAVLRSPIVGLKENDLAFIRSQDAKGTFYEAFKAALNMEEDRYNNELLEQLNLFNSQLLM
WREMARRKELVQLIWSIYNETGFLDYVGGMPAGKQRQANLHALYQRAASYEEMSFKGLFQ
FVRFIEKMAEKDKDLAEPTDLSDNQDAVRVMTIHASKGLEFPVVFVLDLTRRFNLMDLNQ
PYLFDVELGAGIKYLDSRDRLVYKTLPFLAIREAKRNKLLSEEMRKLYVALTRAEEKLFL
VGSYKNQEETFKKWSLANESESLVLSEPARLKGRSLMDWIGLTLMRHPKMSEYQSEFASP
KISELENHLGTFELTFSNLDDLRVQSQKLDRTKNEEQILTTAEKITKLDTQALEWAKNHL
AYSYELEPATRTASYQSVSEIKRVFEDPDNAELLTLDLSEDKPQHVNRYVNDELAKPAFL
SEVQEATGAEVGTATHLLMQLLPLDSTPTIDSIELLIADLQTKELISEVVAKKINRQQII
NFFQTDFGRQLLERHDNVKREAPFSLLLKANDIYQDYPSQSEDTLLVHGIIDGYIETEED
LILYDFKTDYVPNREDLTEFKNKYSGQMKLYRQALEESKGRKVTAIKLVLLGVNQVIDM
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatcagcaaaaagaaacactagggggaatccctttaaaacctgataatagtcac
tttactgatggtcagtggcaagctatttatgatgcaggagataatatcttggtatctgct
tcagcaggatctggtaaaacaacggttttagtccaacgcgtgattgaaaaaatcaagagt
ggcacgaacgttgatgaattgttaattgtgacttatacagaagcggcagctaaagagatg
aaaggtagaatccaagcggctgttcaatcagcaattacggatgaatcaaaccaggagtta
aaacgtcatttggtggaacaattaagtttaattccaactgcccacgtaagtaccttacat
gctttctgtttacaagtgattcgcaagtattattatttgattaatatcgatcccgtcttt
cgtttgttgacagatgagacagaaatgattttactaaaagaagacgtttgggataaagtt
cggaatgacttgtatgctgaccaacaagaagccttctatcaattgacagagaacttctct
aatgaccgtaatgatgacggcttaacgaagttgatttttgccttatatgattttgcacgc
gctaatccagacccgcaagcgtggttggagtctttaggcaaagcttataaatcttctggt
aaaatggcagatttaggcatctaccaagaaatcttaaaaccgaagattttactggaagcc
gagcagttagtcgttcaaggacaagaaatggtgagattatctgaaggggaagaaactctt
cagaagccatttgaatgcgtgagtgaagaattacctgtttatcagcaattacagacattg
ttacttgctgatgatcttgaggctgtgtacagtctaatcaatgaaggtgtcgtgacaaaa
cgctatcctggtttacgtaatttagaaccagaagaaaaagcaattaatgagcaaattaaa
cagttgagaactagcaataaagacatcatcaaaaattggcaggaggggattttcagttta
gaaccttctgttatgcttacagtgatgaaagaatcgcaagaactggttgattatatggca
ggagttgctagtcaattcgacatggcttatcgagcacgtaaagaggagctaaacttagtt
gattttaatgatttagaacactttaccttacaaatattagctgaactaaaagatggtgag
tggcaagggacagaagcttcaaattattaccgtagcctctttaaagaagtcttagtggat
gaatatcaagatattaaccaattacaagaaagtattctgttttggttgcgacaaccgact
tcaggatcaggaaacttgttcatggtgggggatgttaaacaatctatttattcattccgt
ttagctgatccaaccttattcattaataaatataataaatttggtgaaggtgaagacgga
cgtcgaattattttggcagaaaatttccgttctcgcggtgaagtgttagattttaccaat
ttagttttccaacaattaatggatcctaaattaggtcaactggcttatgatttacctgct
caattagtgacaggctttacaggttatcctgaaaacgatcaatttaaaccggaggtctta
atctttgaaagccagactgatgatacagagcaagacgtcttagatgtggatgacagcttt
caaattgatgataagacagaaggtgaacttcgtttagttgggaataagatcaaagagtta
ttccaacaagagtttccaatctacgataaaaaaactcgagaaacgcgtccgattaaatat
agtgatattgtcttgttatcaccaactaaaaagaataatctagttcttttggatattttt
aaagaactgggaatcccattacaggtgaatgatactcaaaattattttcaagccacagaa
attaaaattatgatggcactgttaaatgttatcgataatccgtatcaagatattccgtta
gcagccgtcttgcgttcgccaattgttggtttgaaagagaatgatttagcctttatccgt
tcacaagatgcaaaagggacgttctacgaagccttcaaagctgctttgaatatggaagag
gatcgctataataatgaactgttagaacagctaaatttattcaatagccaattattgatg
tggcgtgaaatggctcgtcgtaaagagttagttcagttaatttggtcaatctataatgaa
acaggcttcctggattatgttggtggaatgcctgctgggaaacaacgccaagctaatttg
catgctttgtatcaacgagccgctagctatgaagaaatgagtttcaaaggcttgttccaa
ttcgtacggttcattgaaaagatggctgaaaaagataaagacttagcagagccaactgat
ttaagtgataatcaagatgctgttcgtgttatgacgattcacgcttcaaaaggattagag
tttcctgttgtctttgtcttagatttaactcgtcgttttaacttgatggatttaaatcaa
ccttacctattcgatgtggaattgggggctggaattaaatatctagattctcgggaccgt
ctagtttataaaacattaccattccttgccattcgtgaggctaaacgcaataagttgtta
tcagaagaaatgcgtaagctatacgtggccttaacgcgtgcggaagaaaaattattcctc
gttgggtcatataagaatcaagaagaaacctttaaaaagtggtcactagcaaacgagagt
gaatcattagtattatctgaaccagctagactgaaaggtcgctctttgatggactggatt
ggtcttacattaatgagacaccctaaaatgtctgagtatcaatcagaatttgcgagtccc
aagatttcagaacttgaaaatcatttaggaacttttgagttaaccttcagtaatctagat
gatttacgagtgcagtcgcaaaaattagacagaactaaaaatgaagaacagatcttaaca
acggctgagaaaattacgaaactagatacgcaagctttagaatgggctaaaaaccattta
gcttattcttatgagttagaaccagctactcgtacagctagttaccaatccgtttctgag
attaagcgtgtatttgaagatccagataacgctgagttgttaacgttagatttaagcgaa
gataaaccacaacatgtgaaccgctacgtgaatgatgagctagctaaacccgccttttta
tcagaagtgcaagaggcgacaggcgctgaagtaggaactgctacgcacttattgatgcag
ttattaccgttagatagcactccaacgatagattctattgagttgctaatagctgattta
caaacaaaagagctgatttcagaggtagttgctaagaaaataaatcgtcaacagataatc
aactttttccaaacggattttggtcgtcaattacttgagcgacacgacaacgtcaaacga
gaagcgccattctccttgttgttaaaagccaatgacatttaccaagactacccaagtcaa
agtgaggacactctgttagttcacgggattatcgatggttatattgaaacagaagaggat
ttaattctttacgatttcaaaaccgactatgttcctaatcgtgaagaccttactgaattt
aaaaataaatacagtggtcaaatgaagctgtatcgtcaagctttagaagaatctaaagga
cgtaaagtaacagctataaaattagttttattaggagtcaatcaagtaatcgatatgtaa
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