Vagococcus coleopterorum: G7081_05980
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Entry
G7081_05980 CDS
T06513
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vah
Vagococcus coleopterorum
Brite
KEGG Orthology (KO) [BR:
vah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vah03400
]
G7081_05980
Enzymes [BR:
vah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7081_05980
DNA repair and recombination proteins [BR:
vah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G7081_05980
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
GerD
Motif
Other DBs
NCBI-ProteinID:
QIL46656
UniProt:
A0A6G8ANS8
LinkDB
All DBs
Position
complement(1208198..1211752)
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AA seq
1184 aa
AA seq
DB search
MGLEFIIGSASADRETPLVEKARDWLVANPNHEVFYLVPNHIKFETEVSVLNKLHTLEPF
NQNKRMASLQLQVFSFTRLAWYYLQNTEGFQSEQVSEAANLMLIRKVLLENSESLTVFKG
EVTKPGFIQQLADLFNELLAGNVQETDLTQLITELGNSPKEADFKTKLTEFNYLYQLYLE
NLAGRQIGITQQISQLAQELPKRDLSQVMFIISGFSRFTAREQELIQTLVSNAAEVKVNL
VLDKSYSTELPDSQNMFYDAGKVYFDLYQFARREQVKVYQDTKVGNSEASDLAMLEDFWV
QSQELSSKKFDGVLKDNQIKLFETPTSYSEMTEVAGEIRRLVASGEYRYRDIEILTRDLA
TYEKIIAPIFDNHAIPFYVNNELAMKHHPLLELLINLFNIDERYYRYNDIMRLLRTELMM
PSLDSETDYLAWQDSRKEFREKIDLTENVSLAYGYEGFYWTQEKDWLYITYDYNEGDVEL
DSDQKAQLYSNEVRNHLRRLLVPFYEKMAKAETAIDGATILYEFLVESGVEQEVNFWRRF
AIEEGNLEEAKIHEQTWQALMNLLDDYVNILGDMPFDFKEFTTIVTTGLEGLTYSKVPTT
LDQVTLSSIDMIHEQKNKVTFMVGMTDTTFPKKIENKTLLSDEERQLVSGHLENGKYLAK
ETKADLAKEPYIAYLAFHSTADKLYLSYPMGIEGSKDVKVSPYMQLIAKGLSIPIERKGN
QVTPEKFEIERISTYRNLISDLLRLKKEAQAAGEFLAPEYVALEKQLLKDPEYQQLSQKL
FASLVAKNITETLNQEMVDALYSSTIHGSVSKVENFHQCQYKYFMTYGLKLKERDTFELS
PAATGDFYHDALDQLFKVLIREKLMLSELTSDDLNSLTNEVLENVLGEDKFTILSASPRM
NYIRYQLSQTIKRVSETLRQQSLRTGMTTVQTEVIFGQIAQTKGLEGLKIDLPNNKALDI
RGKIDRLDQIQVGDQNYLAVVDYKSSRHSFDYRDAYFGLAMQMITYLDVALQNAATLVGS
EQAKPAGAFYLQVKNPTVDGSLAPEKAQEELLKEFSYKGLLLEDEQLLNNLDRTLDENPR
SSVFPYYEKKNGDYSSSQFVSEQDIQLLIEKNRENFKEAGTEIFKGETKLNPAYRDKTRL
ACQFCNYRSICQFDVLLKENNYNRVEPLKKEDVMARLKPKETEE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
gtgggattagaatttattattggatcagcgagtgctgaccgtgaaacgcctttagttgaa
aaagcacgtgactggctagtagccaatcctaaccatgaagtcttctatctagtacctaac
catattaaatttgagacagaagtatctgttttaaataagttacacactttagaaccgttt
aaccaaaacaagcggatggctagtttacaacttcaagtattcagctttacgcgtcttgcc
tggtattatttacagaatactgaaggcttccaatcggaacaagtctcagaagcagcaaat
ttaatgttgattcgtaaggtgttacttgaaaattcagagagtttaacggtcttcaaagga
gaagtgacgaaaccaggttttattcagcaattagctgatttatttaatgaattattggct
ggaaacgtccaagaaactgatttaacgcaattgattactgaattaggtaattcaccaaaa
gaagctgactttaagactaaattgacagagtttaattacctatatcagctttatttggaa
aatcttgcaggacgccaaatcggtataacgcaacaaatcagccaattagctcaagaatta
ccgaaacgtgatttaagccaagtgatgtttatcatctctggcttttcacgttttacagca
cgcgaacaggaattgattcaaacattagtttctaacgccgccgaagtgaaggtaaacttg
gttttagataaaagttatagcactgagttaccagatagtcaaaatatgttctatgatgca
gggaaagtttattttgatctgtatcagtttgctcgtcgagaacaagtcaaggtttatcaa
gatactaaagtgggcaacagtgaagcaagtgatttagcaatgttagaagatttttgggtg
caatctcaagagttatcatcgaagaaatttgatggtgttttaaaagataaccaaattaag
ttgtttgaaacgccaacaagttatagtgaaatgactgaagtcgcaggagaaatcagacgg
ttagtcgcaagcggggagtatcgctatcgtgatattgaaattttgactcgtgatttagcg
acgtacgaaaaaattatcgccccaatttttgataatcacgctattccgttttatgttaat
aatgagttagcaatgaaacaccatccattacttgagttattaattaatttatttaatatt
gatgaacgttattaccgttacaacgatattatgcgtttgttgagaacagaactgatgatg
ccgtcattggatagtgagacggattatttagcatggcaagactcgcgtaaagaatttcgt
gaaaaaattgatttaaccgagaacgtttctttagcctatgggtatgaaggattctattgg
acacaagaaaaagattggctgtacattacttatgattataatgagggcgatgtggagtta
gatagtgatcaaaaagcacagttgtattcaaatgaagtccgtaatcatttacgtcgtttg
ctagtccctttctatgaaaaaatggctaaagctgaaacagctatagatggggcgacgatt
ctttatgaatttttagttgaaagtggcgttgaacaagaagttaatttctggcgtcgtttc
gcgattgaagaaggaaatcttgaagaagccaaaattcatgaacaaacttggcaagcatta
atgaatttgctagatgattacgtgaatatcttaggcgatatgccatttgattttaaagag
ttcacaacaattgtgacgactggtttagaaggtctgacgtatagtaaagtgccgacaacg
ttagatcaggtgacattatcatccattgatatgattcatgaacaaaaaaataaagtgacc
ttcatggtagggatgacagataccactttccctaaaaagattgaaaataaaacattgtta
tcagatgaagaacgtcagttggtttcaggacatctagaaaatggtaaatatttagcgaag
gagacaaaggcggatttagctaaggaaccgtatatcgcttacttagcttttcactcaacg
gctgataaactttacttaagttacccaatggggatagaaggcagtaaagatgtcaaagtt
tcaccttacatgcaactgattgctaaaggattatctattccgatagagcgaaaagggaac
caagtaactcctgagaagtttgaaatagagcgcattagcacgtatcgtaatttaattagt
gacttactgcgattaaagaaagaggcacaagcagcaggtgagtttttagcgccggagtac
gttgccttggagaaacaattattgaaagaccctgagtatcaacagttgagtcagaaatta
tttgctagcttggtagctaagaatattactgaaaccttaaatcaagagatggtggatgcg
ttgtatagttcaactatccacggctctgtctcgaaagttgagaatttccaccaatgtcag
tacaaatactttatgacctacgggttgaagctgaaagaacgagatacatttgaattaagt
ccagcagctactggagatttttatcatgatgcattggatcaattattcaaagtcttgatt
cgtgagaaattaatgcttagtgagttaactagtgatgatttaaacagtctaacaaacgaa
gtgttagaaaatgtgttaggtgaagataaatttactatcttgtcagcaagtccaagaatg
aattatattcgttaccaactaagtcaaacaattaaacgtgttagtgaaaccttaagacaa
caaagtttacgtactggcatgacaacagttcaaactgaagtcatctttggtcaaattgca
caaacaaaaggattagaaggattgaagattgacctacctaataataaagctttagatatt
cgcgggaaaattgatcgtttagatcaaattcaagtaggcgatcaaaactatttagctgta
gtcgattataaatcaagtcgtcatagcttcgattatcgtgatgcttattttggattagcg
atgcagatgattacctatttagatgtggcacttcaaaatgccgctacattagtaggaagc
gagcaagctaaaccagcaggtgcattttatcttcaagtgaagaatccgacagttgatggt
agtttagcccctgaaaaagctcaagaagagttattaaaagagtttagttataaagggcta
ttactagaggatgagcaactattaaataatttagaccgaacattagatgaaaatcctcgt
tcaagtgttttcccgtattacgagaagaagaatggtgattactcatcaagtcaatttgtt
tcggaacaagatatccaattattaattgaaaagaatagagaaaactttaaagaagcagga
accgagattttcaaaggtgaaacaaaattgaatccagcttatcgagataaaacccgctta
gcatgtcaattctgtaattaccgtagcatttgtcagtttgatgtcttgttaaaagaaaac
aactacaatcgtgtggagccgttaaaaaaagaggatgtcatggctcgtttaaaaccaaaa
gaaactgaagaatag
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