KEGG   Vagococcus coleopterorum: G7081_06335
Entry
G7081_06335       CDS       T06513                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
vah  Vagococcus coleopterorum
Pathway
vah03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    G7081_06335 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vah03400]
    G7081_06335 (uvrA)
DNA repair and recombination proteins [BR:vah03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G7081_06335 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      G7081_06335 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 AAA_21 nSTAND1 RsgA_GTPase nSTAND3 AAA_23 AAA_22 nSTAND_NTPase5 AAA_25 AAA_33 APS_kinase AAA_14 AAA_18 NACHT ATPase NB-ARC MMR_HSR1 Viral_helicase1 SLFN-g3_helicase cobW AAA_24 DnaJ_CXXCXGXG DUF87 RNA_helicase NTPase_1 MeaB PRK BCA_ABC_TP_C Septin Rad17 DAP3 Fin Dynamin_N Frankia_peptide
Other DBs
NCBI-ProteinID: QIL46720
UniProt: A0A6G8AP20
LinkDB
Position
complement(1270321..1273143)
AA seq 940 aa
MANDKIVIQGARAHNLKNIDVTIPRDQFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGHP
ICPNDGTEISSQSVEQMVDRVLELPERTKLQILAPLVNGKKGQHKKVFETVKREGYVRVR
VNGELYDISEVPELDKNKKHTIEIVVDRIVVKEGVRSRLFDSFEAALRLAEGYALVDVID
QEEILFSEHYACPHCGFTVGELEPRLFSFNAPYGACSECDGLSMKLEVDEELVIPDPSLT
LREGAFVPWNPITSNYYPQMLEQACKSFKIDMDIPYEKLKPAQKQLLLHGSEGKNFHFHY
ENDFGGVRDVDVPFEGILNNVQRRYQETSSDYVREQMKLYMTELPCQSCHGYRLNAQALS
VKVGGKHIGEVSDYAIANALAFFDQVELSEQEKAIAKPILKEVHDRLSFLENVGLDYLTL
SRSSGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLKKMRDLGNT
LIVVEHDEDTMRAADYLIDIGPGAGAKGGEIIAAGTPEEVEKNPNSLTGQYLSGKKEIAV
PKTRRKGNGKKLRITGASENNLQNVSVDFPLGKFVAVTGVSGSGKSTLVNQILKKALAQK
LNRNSNKPGKFKKMTGYESIDKMISIDQSPIGRTPRSNPATYTSVFDDIRDLFAQTTEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNSETLEVHYKG
KNIADILEMTCDDAVEFFQHIPKIKRKIQTIVDVGLGYVTLGQPATTLSGGEAQRMKLAS
ELHKRSTGNSFYILDEPTTGLHTDDIARLLEVLDRLVEGGNTVLVIEHNLDVIKTADHLI
DLGPEGGSGGGTILATGTPEQLAKVEESYTGHYLKEVLNK
NT seq 2823 nt   +upstreamnt  +downstreamnt
atggcaaatgataaaatagtcattcaaggtgcgcgagcacataatttgaaaaatatagat
gtcacgattcctcgtgatcaatttgtagtcattactggtttatcagggtctgggaaaagt
tcattagcttttgacacgttatacgctgaaggacaacgtcgttatgttgaaagtttatca
gcttatgctcgtcagtttttaggtcaaatggataagccagatgtcgatagtattgatgga
ttaagtccagcgatctcgatcgatcaaaaaacaacgagtaaaaatccccgttcaacagtg
gggactgttacggaaatcaatgactacttgagattattatacgctcgtgttggtcatccg
atttgtccaaatgatggcactgaaatttcaagtcagtcagttgaacaaatggtagatcga
gttcttgaattaccagaaagaaccaagttacaaatcttagcgcctttagtcaatggtaaa
aaagggcagcataagaaagtcttcgaaacggttaaacgtgaaggttacgttcgtgtccgt
gtgaatggtgaactatatgacatctcagaagtacctgaattagataagaataaaaaacat
accattgaaattgttgtcgaccgtatcgttgtcaaagagggcgttcgttctcgtttattt
gactcatttgaagcggccttaagattagcagaaggttatgctttagtagatgtgattgat
caagaagaaatcttgtttagtgaacattacgcttgtccacattgtggttttacagttggt
gaattagaaccccgtctgttttcattcaatgcgccatatggagcctgttctgaatgtgat
ggcttaagtatgaagctagaagtagatgaagagttagtgattccagatccaagtttaacc
ttacgagagggtgcttttgttccttggaatccaattacgtctaattactatccgcaaatg
ttagaacaagcttgtaagagttttaaaattgatatggacataccatacgaaaaattaaaa
cccgcacaaaaacaattattattacatgggtcagaaggtaaaaacttccacttccattac
gaaaatgactttggtggcgttcgtgatgtcgatgtgcctttcgaagggattctaaataat
gttcaacgccgttaccaagaaacaagtagcgactatgtccgtgaacaaatgaaattgtat
atgacggaactaccttgtcaaagttgtcacggttaccgcctaaatgctcaagctttatca
gtaaaagtaggtgggaaacatattggtgaagtgagtgactatgccattgccaacgctcta
gcattctttgaccaagttgagctgtcagaacaagaaaaagcgattgcgaaaccaatctta
aaagaagtacacgatcgtttaagtttcttagaaaatgttggactagattatttaacatta
agccgttcgtctggaaccttatcaggtggtgaagcccaacggatccgtttagcaacgcaa
attggttcaaacttatcaggtgttctttacatcttagatgagccatcaattgggttacac
caacgagataatgaccgtctgattgaatcccttaaaaagatgcgtgacttaggaaatacc
ttaatcgtcgttgaacacgatgaagatacgatgcgtgcagctgattatttaatcgatatt
ggtccgggtgccggtgctaaaggtggcgaaattattgccgctggaacgccagaagaagtt
gagaaaaatccgaattcattaaccggacaatacttgtcaggtaaaaaagaaattgctgtt
cctaaaacaagacgtaagggaaatggtaagaaattaaggattactggggcttcggaaaat
aacttacaaaatgtatcggttgatttcccactaggtaaattcgtagcagttactggtgta
tcaggttcagggaagagcacgttagtcaatcaaatcttgaaaaaagctttggcgcaaaaa
ttaaaccgtaactcgaataaacctgggaaattcaagaagatgactggttatgaatcgatt
gacaagatgattagtattgatcaaagtccaattggtcggacaccaagaagtaatccagcg
acttacacaagtgtctttgatgatattcgtgacttatttgctcaaacaactgaagctaaa
gttcgtggttataaaaaagggcgctttagttttaacgtgaagggcggccgctgtgaagcc
tgtcgtggtgacgggattattaaaattgaaatgcatttcttgccagatgtttacgtgcca
tgtgaagtctgtcatgggaaacgttataattcagaaacgttagaagttcattacaaaggt
aaaaacattgcagacattttagaaatgacttgtgatgatgctgttgagttcttccagcat
attccaaaaattaaacgtaaaatccaaacgattgtagatgttggtttaggatatgtgaca
ttaggacagccagcaacaactttatctggtggtgaagctcaacgaatgaagttagctagc
gagttgcataaacgttcaactggtaacagtttctacatcttagatgaaccaacaacagga
cttcacacagatgatattgcacgtctgttagaagtgttggatcgtttagttgaaggtggt
aatacagtgctagtgattgaacataatttagatgtcattaaaacggctgatcacttaatt
gacttaggtccagaaggtggttcaggcgggggaactattcttgccactggaacaccggaa
caacttgcaaaagttgaagaaagttatacaggacactatttaaaagaagttttaaataag
taa

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