Candidatus Velamenicoccus archaeovorus: BU251_00020
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Entry
BU251_00020 CDS
T05804
Name
(GenBank) DNA topoisomerase tpye II (gyrase) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
vai
Candidatus Velamenicoccus archaeovorus
Brite
KEGG Orthology (KO) [BR:
vai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vai03032
]
BU251_00020
03400 DNA repair and recombination proteins [BR:
vai03400
]
BU251_00020
Enzymes [BR:
vai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BU251_00020
DNA replication proteins [BR:
vai03032
]
Prokaryotic type
DNA Topoisomerases
BU251_00020
DNA repair and recombination proteins [BR:
vai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BU251_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
QAT16235
UniProt:
A0A410P213
LinkDB
All DBs
Position
2875..5295
Genome browser
AA seq
806 aa
AA seq
DB search
MAEANKKYDATAIQVLEGMEAVRMRPAMYIGDTTNRGLHHLVFEVVDNSVDEALAGFCKR
ISIIVHENQSVSVIDDGRGIPVDIHAKEKKPAVEVALTTLHAGGKFDHRAYKVSGGLHGV
GVSVVNALSEWLEVEIRRDEKVYHQRYERGKTVSKLTVIGKAKATGTKVTFKPDKQIFKA
IDMSYDTLANRLRELAFLNKGLSIKLADERSEKEAEFCFNGGIISFVEHLNKNKNPLHNK
VLYVEKSGEDMVLELGMQYNDSYAENIFTYANNINTVEGGTHLSGFKSALTRAINQYVKS
KNLLKDSSATISGDDVREGLTAVISLKVPNPQFEGQTKTKLGNSEAEGFVASQVFEFLTT
IFEEHPSVANKIVEKAVLAARAREAARKARELTRRKGALEGLSLPGKLADCSETDASMSE
LFIVEGDSAGGSAKQGRDRRFQAILPIKGKILNVEKSRLDKILSNEEIRTILTALGTGVG
EEFNLEKLRYHKIVIMCDADVDGSHIRTLLLTLFLRQLPRLIEGGHIYIAQPPLYKIKRG
NREEYIQTEEQMNQLMLDIGREGLKFSVLADKKTLNDPQFKELLEDLVQLDRFNIHLEKN
GVDLEKLVSNRHKGSKKLPIYVAKVEQEAHYLFSDAELAKLSESAKGEKEEFNYVEIYDA
EDIEKVITKIEKMGIPIETYFGPSKRKEDASVRSGKQAEGGKRVKPAFRITNEVDVEFFA
LKEVLEHVKELAKRGMTFQRYKGLGEMNPQQLWDTTMDPERRTILKVLLEDAIEADEIFT
ILMGDQVDPRREFIEKNAHMVRNLDI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgaacaagaagtatgacgcgacagcaatacaggttttggaaggcatggaa
gccgtccgcatgcggcccgcaatgtatatcggcgatacgacgaaccgcggcctgcatcat
ctggtctttgaggtcgtcgacaattccgtcgatgaggcgttggcggggttttgcaaacgc
atcagcatcatcgtccacgagaaccagagcgtcagcgtgatcgacgacggccgcggcatc
cccgtcgatattcacgccaaagagaaaaaaccggccgtcgaagtcgccctgacgacgctc
catgccggcggcaagttcgaccaccgggcgtacaaggtgtccggaggtttgcacggcgtg
ggcgtcagcgtcgtcaatgcgctttcggaatggctcgaggtcgagatccggcgcgacgag
aaggtttatcaccagcgttacgagcgcggcaagaccgtttccaagctgacggtcatcggc
aaggccaaggccaccggcaccaaggtgacctttaagccggacaagcagatcttcaaggcc
atcgacatgtcttacgacaccttggccaaccgcctgcgcgagctggcctttttgaataag
ggtctttctatcaagcttgccgacgagcggtcggagaaggaggccgagttctgtttcaac
ggcggcatcatctcctttgtcgagcacctgaataaaaacaagaacccgctgcacaataag
gttttgtatgtcgagaagtccggcgaggatatggtcctggagctgggcatgcagtataac
gacagctacgcggaaaacatctttacgtacgccaacaacatcaataccgtcgagggcggt
acgcatttgagcggttttaaatccgccctcacgcgcgccatcaaccagtacgtcaagagc
aagaacctcctgaaggactccagcgccacgatctccggcgacgatgtccgcgaagggctc
acggcggtcatcagtctcaaggtccccaatccccagttcgaggggcagaccaagaccaag
ctgggcaattccgaggccgaagggtttgttgcctcccaggtgtttgagttcctgacgacc
atttttgaagagcatccttccgtcgccaacaagatcgtcgagaaagcggtgctggcggcg
cgcgccagagaggcggccaggaaggcgcgcgaactgacccgccgcaagggcgcccttgag
gggctttccctgcccggcaagctcgccgactgttcggaaacggatgcctccatgtccgag
ctttttatcgttgaaggtgattctgccggcggttcggccaaacagggcagggaccggcgt
tttcaggcgatcctgcccatcaaggggaagatcctgaacgtcgagaagtccaggctcgac
aagatcctgagcaatgaagagatccgcacgatcctgacggccctcggcacgggcgtcggc
gaggagttcaatcttgaaaaactgcgctaccacaagatcgttatcatgtgcgatgcggat
gttgatggatcgcacatccgcacgctcctgttgacgctttttttaaggcagctgcccagg
ctgatcgaaggtggccacatctatatcgctcagccgcctttgtataagatcaagaggggc
aacagggaagaatatatccagacggaagaacagatgaatcaattgatgttagatattggc
agagaaggacttaagttttctgttcttgcggacaaaaagacactcaatgacccgcaattc
aaagaattgcttgaggatctggtccagctggatagatttaacatacatttagagaaaaat
ggagttgatttagaaaaattggtctcaaatagacataaaggttccaaaaaattgcctatt
tatgtggcgaaagtggagcaagaggcccattatttgttctctgacgccgagcttgccaag
ctttcagagtctgccaagggtgaaaaggaagagtttaattatgtcgagatttacgacgca
gaagatatagagaaagtgatcacgaagatcgagaagatgggtatccccattgaaacgtat
tttggtccttccaagcgcaaagaggatgcttctgtccggagcggcaaacaagcggagggc
ggcaagagggtcaagccggcttttaggatcacgaacgaggtggatgtggaattttttgcg
ctcaaggaagttctggaacacgtcaaggaattggccaaaagagggatgaccttccagcgc
tataaaggtttgggcgagatgaatccgcagcagctctgggataccacgatggatcccgag
cggcggacgatcctgaaagtgcttctggaagacgcgatcgaggccgacgagatctttacg
attctgatgggagaccaggtggaccctcgccgggaattcatcgagaaaaacgcccacatg
gtgaggaatttggatatttga
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integrated database retrieval system
