Candidatus Velamenicoccus archaeovorus: BU251_00965
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Entry
BU251_00965 CDS
T05804
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vai
Candidatus Velamenicoccus archaeovorus
Brite
KEGG Orthology (KO) [BR:
vai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vai03032
]
BU251_00965
03400 DNA repair and recombination proteins [BR:
vai03400
]
BU251_00965
Enzymes [BR:
vai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BU251_00965
DNA replication proteins [BR:
vai03032
]
Prokaryotic type
DNA Topoisomerases
BU251_00965
DNA repair and recombination proteins [BR:
vai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BU251_00965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
TMIE
Motif
Other DBs
NCBI-ProteinID:
QAT16397
UniProt:
A0A410P2H0
LinkDB
All DBs
Position
302531..304567
Genome browser
AA seq
678 aa
AA seq
DB search
MSKKAIVIVESPAKARTISKFLGKDFSVVSSMGHIVDLPQKKLGVEIDNAYKTEYVVIPG
KKKLLGELKKTAKDVDAVYFATDPDREGEAIGWNLKEWMSLKKQEVYRVEFHEITKSAID
EAFRSPRAFNEDRIRAQQARRILDRIVGYFLSPLLWRKVTRGLSAGRVQSVALRLIVERE
KEIRAFVPQEYWSIDAEFKKKEGAAKDKRPFRASLEKIDDQKIQIANEAEAQKIVADLAA
KDFKVESVDKTMKSRSPLAPFITSTLQQDAFNKLRYSATKTMFIAQQLYEGIEVGEEGPV
GLITYMRTDSTQVAQVALSEVRSFISSAYGAPYLPDAPRVYKSKKLAQEAHEAIRPTGVK
RTPKDMQAYLTPEQLKLYELIWKRFVASQMNPAQMEQTSVVIRADRYALKATGSRLIFDG
FSVLYKSEDDSEEEAKKELPALAAADALTLVTLEPGQHFTKPPARYSEGSLIKALEEDGV
GRPSTYAPTIATVVSRDYVRREKGYLLPTDLGIKVSELLVSYFPQVMDVSFTAHMEEELD
MIEDGKADWVKILNEFYAPFKEKLDFAAQDIKKEVIYTDEICDKCGKPMVVKWGRKGKFL
SCSDYPTCKNSKSISSGVKCPAPGCGGDLILRRSYRGRSFYGCSNYPKCTFTSRDLPSTE
ETPAADAQDKNTLPPQGD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaaagccattgtgatcgtagagtcgcctgccaaggccaggacgatctccaaa
ttcctcggcaaggatttttccgtcgtcagttccatggggcatatcgtggacctgccgcaa
aagaagctgggcgtggagatcgacaacgcatacaagacggaatacgtcgtcatccccggc
aagaagaagctcctgggcgaattgaaaaagacggccaaggatgtggacgccgtttatttc
gcgaccgaccctgaccgggagggcgaggcgattggatggaatctgaaggaatggatgtcg
ttaaaaaaacaggaggtctaccgggtcgaattccacgagatcacgaagtcggcgatcgac
gaggcgttccgttcgccgcgcgcctttaacgaggaccgcatccgcgcccagcaggcccgg
cgcatcctcgaccgcatcgtcggatatttcctgagtcctttgttatggcgcaaggtgaca
cgaggcttgagcgcgggccgcgtccagtcggtggccctccggttgatcgtcgaacgcgaa
aaagagatccgcgcctttgtgccccaggaatactggagcatcgacgccgaattcaagaaa
aaggagggggcggccaaagacaagaggcctttccgggcgtccttggagaagatcgacgac
cagaagatacagatcgcaaacgaagcagaggcgcaaaagatcgttgcagaccttgccgcc
aaggatttcaaggtcgagagcgttgacaagacgatgaaatcacgctctcccctggcgccg
ttcatcaccagcaccctgcagcaggacgcctttaacaagctgcggtattcggcgaccaag
acgatgttcatcgcccagcagctctatgaaggcatcgaggtgggcgaggaaggccctgtg
gggttgatcacctatatgcgcaccgattcgacgcaagtggcgcaggtggctttgagcgaa
gtccggtcttttatctcttcggcatacggcgcgccctatctgcccgatgcgccgcgcgtt
tataaatccaaaaagctggcccaggaagcccatgaggccatccggccgaccggcgtcaag
cgtacgccgaaagacatgcaggcgtacctgacccctgaacaacttaaactatacgagctg
atctggaaacgtttcgtggcgtcccagatgaacccggcgcagatggagcagacctcggtc
gtgatccgggcggaccgttatgccctgaaggcgactggctcccggctcatttttgacggt
ttcagcgttctctacaagtcggaggatgattccgaggaagaggccaaaaaagagctgcct
gccttggctgcggcggacgccctgactctggtcacgcttgagccgggccagcacttcacc
aagccgccggcccgctactcggaaggttcgctcatcaaggccctcgaagaagacggggtg
ggccgccccagcacctacgcgccgacgatcgcgaccgtcgtgtcgcgggattatgtccgc
cgggagaaggggtatctcttgccgacggacctgggcatcaaggtgagcgaattattggtc
agctattttcctcaggtcatggacgtctcctttacggcgcacatggaggaagaactggat
atgatcgaggacggcaaggccgactgggtcaagatcctgaacgaattctatgcgccattc
aaggagaagctggatttcgcggcgcaggacatcaagaaagaagtcatctacaccgatgag
atctgcgacaagtgcggcaagcccatggtcgtcaaatgggggcgcaaaggcaaatttttg
agctgttcggattatcctacctgcaaaaactctaagtccatttcttcgggcgtcaaatgc
cctgcccccggctgcggaggcgatctcatcctgcggcggtcctatcgcggccgctcgttc
tacggttgcagcaattatccgaagtgcaccttcacgtcgcgcgacctgccttcgacggaa
gagacgccggccgcggatgcacaagataagaacactttaccgccgcaaggcgattga
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