Candidatus Velamenicoccus archaeovorus: BU251_01200
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Entry
BU251_01200 CDS
T05804
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vai
Candidatus Velamenicoccus archaeovorus
Pathway
vai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BU251_01200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vai03400
]
BU251_01200
Enzymes [BR:
vai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BU251_01200
DNA repair and recombination proteins [BR:
vai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BU251_01200
RecFOR pathway proteins
BU251_01200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
bpMoxR
Rad17
nSTAND3
Sigma54_activ_2
AAA_3
TsaE
RNA_helicase
IstB_IS21
AAA_14
DUF815
NPHP3_N
NB-ARC
NTPase_1
AAA_18
Parvo_NS1
Gtr1_RagA
ABC_tran
AAA_33
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QAT17973
UniProt:
A0A410P7A1
LinkDB
All DBs
Position
357197..358198
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AA seq
333 aa
AA seq
DB search
MIARGAAKGDEVTSRNETDEDVVLNISLRPATLEEFIGQKEVVDNLKLSITAARQRSEPL
EHVLLCGPPGLGKTCLASIIAHEMGTKITATSGPAIERAGDLIGILTNLEAGDVLFIDEI
HRLSKVVEEFLYPAMENFQIDFVIDKGPYARTIKFNLKRFTLVGATTRSGLIGSPLRSRF
GILHHFDFYKDEDLARIIKRSASLLGIAVDDGGAAEIARRARGTPRIANRLLRRVRDYAQ
VHGASGIVRSLADEALKGLGIDEHGLDEADRRVLRTILSTYRGGPVGIETLAATLNEEPD
TIMDTIEPYLLKAGFLKRTSRGREATDLARNLF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atcatagcccggggcgcggcgaaaggtgacgaggtcacgtcgcgcaacgagacagacgaa
gacgtcgtcctgaatatttccctgcggccggcgacgctggaagaatttatcggccaaaaa
gaggtcgtcgacaacctgaagctgtccatcacggcggcccggcagcgcagcgagcctctg
gagcatgtgcttctctgcggcccgcccggcctgggcaagacgtgtttggcgtcgatcatc
gcccatgagatgggaacgaagatcacggccacatcgggaccggcgatcgaacgcgccggc
gacctgatcggtatcctgacaaaccttgaagcgggagatgtgctttttatcgatgagatc
cacaggctctcgaaggtcgtcgaggaatttttgtatcccgccatggagaatttccagatt
gactttgtcatcgacaaggggccgtacgcccggacgatcaagttcaatcttaaacgtttc
acccttgtgggggccacgacccgcagcggacttatcggttcgcccttgcggtcccggttc
gggatcctgcaccacttcgatttctacaaggacgaagatctggccaggatcatcaagcgt
tctgcgtctttgttggggatcgcggtggatgatggcggggcggcggagatcgcgcgccgc
gcgcgcggcacgccccgcatcgccaacagactgttgagacgcgtcagggactatgcccag
gtccacggcgcctccggtattgtgcgctccttggccgatgaggccctcaagggcctgggc
atcgatgaacacggccttgatgaagccgaccggcgtgtcctgcggacgatcctgtcgacc
tatcgcggcggacctgtcggtatcgagaccctcgccgcgaccctcaacgaagaaccggac
accatcatggatacgatcgagccgtatctgttgaaggccggttttctgaaacgcacatcc
cgcgggcgggaggcgaccgatcttgcccgtaacctattctaa
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