Candidatus Velamenicoccus archaeovorus: BU251_03225
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Entry
BU251_03225 CDS
T05804
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vai
Candidatus Velamenicoccus archaeovorus
Pathway
vai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BU251_03225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vai03021
]
BU251_03225
03400 DNA repair and recombination proteins [BR:
vai03400
]
BU251_03225
Enzymes [BR:
vai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BU251_03225
Transcription machinery [BR:
vai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BU251_03225
DNA repair and recombination proteins [BR:
vai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BU251_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QAT16813
UniProt:
A0A410P3V6
LinkDB
All DBs
Position
746733..747725
Genome browser
AA seq
330 aa
AA seq
DB search
MGIKWKDFQLPKFLEIDEATHTGTYARFIAEPFERGFGVTLGNSLRRVLLSSIEGSAVTA
VKIENVLHEFSAIEGVQEDVTDIILNIKNLILSSHSRAPKSVYIKKDKAGEVTGRDIITD
GTVEVLNPDLHIATLTKDIKFNVEIEVGRGRGYVAAEVNKKEEQAIGAIPVDSAFSPVKK
VAYHVENTRVGQKTDYDRLVIEVFTNGSIDPKDAMLYAANILRGHLDVFLNLGQIPEEME
EEEAMTPEEAQLYEKLRLPISELELSVRSSNCLREADIKIIADLVRKSESELLGLRNFGK
KSLTEVKELIVAMGLNLGMQIDENKLKKEK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggggattaagtggaaagattttcagttacccaagtttttagaaatagatgaggcgacg
catacggggacctatgccagatttatcgctgagccttttgagcgcggtttcggcgtgacg
ctgggtaactccttgaggcgcgtcttgttgtcttccatcgagggcagcgccgtgacggcc
gtcaagatcgaaaatgtccttcatgaattcagcgctattgaaggcgtgcaggaagacgtg
acggatatcatcctcaatatcaagaatctgatcttgagttcgcattcccgggctcccaaa
tccgtctatatcaagaaagacaaggccggagaggtgacagggcgtgatatcattacagac
gggaccgttgaggtcttgaatccggaccttcatatcgccaccttgaccaaggacattaaa
ttcaatgttgagatcgaagtgggccggggccggggatatgtggctgccgaggtcaacaag
aaagaagaacaggcgatcggagccattccggtggattcggctttttcacccgtcaaaaaa
gtggcttatcacgtcgaaaatacccgcgtcggccaaaagacggattacgatcgtctcgtc
atcgaggtattcaccaacggcagcatcgatcctaaggatgcgatgctatacgccgccaat
atcctgcgcggtcatttggatgttttccttaatctggggcagatccccgaagagatggaa
gaggaagaagccatgacgcccgaggaggcccagctttatgaaaagctgcgtctgccgatt
tccgagcttgaattgtccgtccgcagttccaactgcttgcgcgaggccgacatcaagatc
atcgctgatttggtcaggaagtcggagagtgaacttctggggttaaggaatttcggaaag
aagtccttgacggaggtcaaagagcttattgtggcgatgggtctgaatctcgggatgcag
atcgacgaaaataaattgaagaaagagaagtaa
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