Candidatus Velamenicoccus archaeovorus: BU251_04660
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Entry
BU251_04660 CDS
T05804
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA, proteobacterial protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vai
Candidatus Velamenicoccus archaeovorus
Pathway
vai03420
Nucleotide excision repair
vai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BU251_04660
03430 Mismatch repair
BU251_04660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vai03400
]
BU251_04660
Enzymes [BR:
vai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BU251_04660
DNA repair and recombination proteins [BR:
vai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BU251_04660
MMR (mismatch excision repair)
Other MMR factors
BU251_04660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
QAT17075
UniProt:
A0A410P4E4
LinkDB
All DBs
Position
complement(1021610..1023718)
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AA seq
702 aa
AA seq
DB search
MSSWKSRKDFVSGCLSLKVPLMKTSKIEDFKSVLNPAQWDAVTTMEGPLLVVAGAGTGKT
RVIEYRCLYMIENGILPEQILLLTFTRKAAREMLGRASLHDPRCRKIEGGTFHSFAYRLI
RQYKSVLGLGDIISFLDEADSADLLHLLAAKAGFLEDKSRFPKKDTLRAVLSMSTNRNQP
IRDVLAKDYPHFVPLSAPLEELRKMYTQFKLERNLIDYDDMLIYLKFLLENTAINEKAAA
HFRYVMVDEFQDTNKIQADIVYSLGARHNNCMAVGDDTQSIYSFRGAYYKNMFEFPKRFP
DTKIIKLEYNYRSTQPILDVANAVIEGEKQKYSKVLFTTQPGDEKPTLSYFKDAFSEAEW
VAHKIKEYRDEGVPLGSLGVLYRSNYLSLPVQLALSKLNIPFAVFGGMKFIETAHVKDVM
AFLKAHHNPKDEISIARILMLLDGIGPRTAERVKEIILGADTQRLEADLALVVKSAEARR
ELLKLAELFRLLPGIETIEKKIKKVIQFYTPILKKKFDDYPARQEDLEAFVEISSGYTSL
EQFLVDFVTIEPPERSVLEAEGKKEDERPVTLSTVHSAKGLEWEVVFVIALVDGSIPVSY
ALDDEEAIEEERRLLYVAVTRARKYLHFSLHNEGRNGGMSSFNRLSRFVSEPRVLEKIRT
DYAWYEDEGFALDQTGTRRMDKDELYRKLTDYFEMDNGKDYF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttggaagagccgcaaggatttcgtatccggctgtttatcgctgaaggtccct
ttaatgaaaactagcaagatagaggattttaaatccgtactgaatccagcccaatgggac
gccgtcacgacgatggaaggcccgctgcttgtcgtcgcaggggccggaacaggaaagacg
agggtcatcgaataccgctgcctttacatgatagagaacggcattcttccggagcagatc
ctgttgttgactttcacgcgcaaggcggcgcgcgaaatgctcggccgtgcctctttgcac
gatccccggtgccgcaagatcgaaggagggacattccattctttcgcctaccggctgatc
cggcaatataagagcgtcctgggtttgggcgatatcatctcatttttggatgaagccgac
agcgccgacctcttgcatcttctggccgccaaggccggtttccttgaggacaagtcccgc
tttccgaaaaaagacacgctgcgggccgtcctgagcatgagcacgaaccgcaaccagccg
atccgggacgtcctggccaaggattatccgcattttgtgcctttgtcggcccccctggag
gaactgcgcaagatgtatacgcaattcaagctggagcgcaatcttatcgattatgacgac
atgctgatctatctcaaatttttgcttgagaacaccgctatcaacgagaaggccgcggcg
catttccggtatgtcatggtcgacgaattccaggacaccaataagatccaggcggatatc
gtttattctcttggcgccaggcacaataattgcatggccgtgggcgacgacacgcagagc
atctacagtttccggggcgcttattataaaaatatgttcgagttccccaagcgttttccc
gacacgaagatcatcaagctggaatacaactatcgttccacacagccgatcctggatgtg
gccaatgccgtcatcgaaggggagaaacagaaatattccaaggtgctttttacgacacag
ccgggagacgagaagcccaccttgtcctattttaaggacgcgttcagcgaggccgaatgg
gtggcgcataagatcaaggaatacagggatgaaggggtgcccctgggttccctgggggtg
ctctacaggtcgaactacctgtcgttgccggttcagttggccctctccaagcttaatatc
ccctttgccgtcttcggaggaatgaagttcatcgagacagcccatgtcaaggacgtgatg
gcttttctgaaagcccatcataaccccaaggatgagatatcgatcgccaggatcctgatg
ctcttggacgggatcgggccgcgcacggccgaacgcgtcaaggagatcatcctcggcgcc
gacacccagcgtctggaagccgacctcgcgcttgtcgtcaagagcgcggaggcccgcagg
gagctgttgaagctggcggagctctttcgtcttctgccgggcattgagacgatcgagaag
aaaatcaagaaagtcatccagttttacacgcctatcttgaagaagaaattcgacgattac
ccggcgcgtcaggaagacttggaagcgtttgttgagatctccagcggttatacgtcgctt
gaacagtttcttgttgattttgtcacgatcgaaccgccggagcgcagcgttttggaagca
gagggcaaaaaagaagacgagcgtcccgtcaccttatcgacggtccactccgccaagggt
ctggagtgggaggtcgtcttcgtgatcgccctggtcgacggcagcatcccagtgtcttat
gcgcttgacgacgaggaggcgatcgaggaagagcggcggctcctttatgtggcggtcacg
cgcgccagaaaatatctgcatttttctctgcataacgagggccgcaacggcgggatgagc
agttttaaccggctgtcgcgttttgtctcggagccgagggtattggagaagatccggacc
gattatgcgtggtatgaagatgaggggttcgcgcttgatcagaccggaacgcgccggatg
gataaggatgaactttatcgtaaactgacggattacttcgagatggacaatggcaaagat
tatttttga
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