Candidatus Velamenicoccus archaeovorus: BU251_05650
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Entry
BU251_05650 CDS
T05804
Name
(GenBank) peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vai
Candidatus Velamenicoccus archaeovorus
Pathway
vai00550
Peptidoglycan biosynthesis
vai01100
Metabolic pathways
vai01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BU251_05650
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BU251_05650
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vai01011
]
BU251_05650
Enzymes [BR:
vai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BU251_05650
Peptidoglycan biosynthesis and degradation proteins [BR:
vai01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BU251_05650
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Ntox33
Motif
Other DBs
NCBI-ProteinID:
QAT17248
UniProt:
A0A410P586
LinkDB
All DBs
Position
complement(1231609..1233324)
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AA seq
571 aa
AA seq
DB search
MRTRIYGITLLVCFFLLLCGLLVVQLIGGGRYYELSLRNTIRLIPEEPYRGRILDRHQQV
IVDNVLSFDAVIMPQELKDKNDVFSRLAPILSLDPSEIEERYARGYLNPFTPVVIAEGIP
KSTAIMLEEKKLDLRGVAVELNSRRHYPFGTTAAHVLGYLGEIDKSRITRLKDYGYDIKD
NVGYSGVEERLDIYMRGQKGGRQIEVDNRGRQVRLLGYKPPVAGEDVTLTIDLELQQIAD
NLLQGKKGAVIVMDAQTGEVLVLSSAPAFDPNVFVDRSDRRAMNYYLTSDDAPLFNRVTS
GQFPPGSIFKVVTASAALQADKGVSLVTAYVCQGQMRIGNRFFKCWSTHGAQDFNAAIAH
SCDVYFYQLGLLAGPDLLSHTAQEFGLSQPTGIDLTHEASGFIPSRLWKRLTKFEGWYDG
DTANFSIGQGFVLTTPLQLARMMAAVGNGGYLPVPHVTKAVAGREVSVAAPKPVRISPEY
LDMVRKALRYPVSLESGTAHVLEIPGLEICAKTGTAQVYGKESHGWVAGFFPLSRPRYAF
CVLLENVGSSHYACVLARDLFEEAQKRGKLS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacccgaatctacggaataacgcttttggtttgtttttttcttttgctctgcggc
ctcttggtcgttcagctgatcggcggcggccgctattatgagttgagtctgcgcaatacc
atccgccttatccctgaggaaccttacaggggccgtatcctggatcgtcatcaacaggtg
atcgtggacaacgtgttgtcgttcgacgccgtcatcatgccgcaggagctgaaagacaaa
aacgatgtgttcagccgtctggcgcctatcctgtctttggatccttcggaaatcgaggaa
cgttatgccaggggctatcttaatccttttacgcccgtcgtcatcgccgaagggatcccc
aaatcgacggccatcatgctggaagagaaaaagctggacctgcggggcgtcgccgtcgag
ctcaacagccgccggcattatcctttcggcacgacggcggcccatgtgctgggctatctg
ggcgagatcgacaaaagccgcatcacgcgcctcaaggattacggctatgacatcaaggat
aacgtcggatacagcggcgttgaggagcgcttggacatctatatgcggggccagaaaggc
ggacgccagatcgaggtggacaataggggccgccaggtcaggcttctggggtataaaccg
cccgtggccggcgaagatgtgacgttgacgatcgatctggagcttcagcagatcgcggac
aacctccttcagggtaaaaagggcgccgtgatcgtcatggacgcccagacaggggaggtg
ctggtgctcagcagcgccccggcttttgatcccaacgtgttcgtggatcgcagcgaccgg
cgcgccatgaattattatttgaccagcgacgatgcgccgttgttcaaccgcgtgacgagc
ggtcagtttcccccggggtccatttttaaggtcgtcacggcctccgccgccctgcaggcc
gacaaaggtgtttcgcttgtcacggcatatgtgtgccagggccagatgaggatcggcaac
cgtttttttaagtgctggtcgacgcacggcgcgcaggatttcaatgccgccatagctcat
tcctgcgacgtttatttttatcaactggggttgttggcaggtccggatcttctgtcgcat
acggcgcaggaattcggtctttcgcagccgacagggatcgatttgacccacgaggcatcg
ggttttatccccagtcgtctttggaagcgcctgacgaagttcgagggctggtatgacggc
gacacggcaaacttttccattggtcagggttttgtccttacgacacctctgcagttggcg
cgcatgatggccgctgtcggcaacggaggatatctgcctgttccccatgtgaccaaggcc
gttgcgggcagggaagtctctgtggcagcgcccaagcccgtcaggatatccccggagtat
ctggatatggtgcgcaaggccctgcgttatcctgtgtcgcttgagagcggcacggcgcac
gtgctggaaatccccggccttgagatctgcgccaagacggggacagctcaggtttacgga
aaagagtcgcatggctgggtggccggattttttccgctgagccggccccgctacgcgttc
tgcgtgcttctggagaatgtcggcagcagccattatgcctgcgtcttggcgcgcgacctg
tttgaagaggcccaaaagagagggaaactgtcatga
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