Candidatus Velamenicoccus archaeovorus: BU251_05815
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Entry
BU251_05815 CDS
T05804
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vai
Candidatus Velamenicoccus archaeovorus
Brite
KEGG Orthology (KO) [BR:
vai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vai03016
]
BU251_05815
Enzymes [BR:
vai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BU251_05815
Transfer RNA biogenesis [BR:
vai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BU251_05815
Prokaryotic type
BU251_05815
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
QAT17280
UniProt:
A0A410P580
LinkDB
All DBs
Position
complement(1265561..1266253)
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AA seq
230 aa
AA seq
DB search
MKNGILVIDKPSGVTSHDVVDMVRRKLNTKRVGHSGTLDPVATGILVILVGSATKLFSKF
VHFDKAYEATLHLGEVTSTGDTEGRLLSQKDPSHITEEEVRRVFASFIGERLQVPPMVSA
IKHKGRRLYELARRGIEVERKARPIRIYDLQIVRMKLPDIDFFVKCSKGTYIRRLGEEIG
EVLGVGGVISRIRRVALGPFHIQDAITTGEINEDRLRDWPGLQTDSAAAR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacggcatcctcgtcatcgacaagccgtcaggcgtgacgtcgcacgatgtcgtt
gatatggtacggcgcaagctcaataccaagcgcgtggggcacagcgggaccctggatccc
gtcgcaacagggattcttgtcattctcgtcggtagcgcgacgaagcttttttcgaagttt
gtccattttgacaaggcctatgaggcgacgctgcatctgggtgaggtgacgtcgacaggg
gataccgaagggcgcctcttgtcccagaaagacccgtcgcatattaccgaggaggaggtc
cgtcgcgtgttcgcttcattcatcggcgaacgcctgcaggtgccgcccatggtttccgcg
atcaagcacaaaggccgccggctttatgagctggcgcgcagaggtattgaagtcgagcgc
aaggccaggccgatccgtatctacgatttgcagatcgtccggatgaaattgccggatatc
gattttttcgtcaagtgttccaaagggacctatatcaggcggctgggcgaggagatcggc
gaagtcctgggtgtcggaggcgtgatttcccggatccgccgcgtggccctcggtcctttt
catatccaggatgcgatcacgaccggagagatcaatgaggatcgtttacgggattggccc
gggcttcagacagacagcgccgcggcgcgataa
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