Candidatus Velamenicoccus archaeovorus: BU251_05955
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Entry
BU251_05955 CDS
T05804
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vai
Candidatus Velamenicoccus archaeovorus
Pathway
vai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BU251_05955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vai03019
]
BU251_05955
03016 Transfer RNA biogenesis [BR:
vai03016
]
BU251_05955
Enzymes [BR:
vai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BU251_05955
Messenger RNA biogenesis [BR:
vai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BU251_05955
Transfer RNA biogenesis [BR:
vai03016
]
Prokaryotic type
tRNA degradation factors
BU251_05955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_NusA_2nd
OB_RRP5_4th
OB_PDCD11
KH_2
DUF5813
CTD9
S1_2
Motif
Other DBs
NCBI-ProteinID:
QAT18033
UniProt:
A0A410P7E2
LinkDB
All DBs
Position
complement(1289817..1291919)
Genome browser
AA seq
700 aa
AA seq
DB search
MNPKIEKVEAPFGDKNLILSTGKLAKQADGAVTVQMGDSVVLVTACVSKDIREGIDFFPL
TVEYQEKTYAAGRIPGGFFKREGRPSESEILISRLIDRPVRPLFPCGFRNDVQVIALVLS
SDAENDPDVLAVIGASAALGISQIPFEGPIGAVRIGRVDGKLVVNPTYAQREASDLDLVV
VGNRKKVIMIEGEAKGLEEAVVYEALKFGHEQLQVSIKIQEDLIKACGREKMSYEDRAVS
PELVKSIKAAYMNRVKENCKIAQKEARMEAVQMLYKDVTERFCVEKEGEDQISEKDIKAA
LDEIESEEIRKLALEENRRVDGRKFDEVRAISCEVGNLPRTHGSGLFTRGQTQSLAVTTL
GTRADEQLIEALEGKSYKKFMLHYNFPPFSVGEVKPVRGAGRREIGHGALAEKSLKAVMP
TPEEFPYTVRVVSEILESNGSSSMATVCASSLSLMDAGVPIKEPVAGIAMGLVQEDSKHL
LLTDIAGLEDHHGDMDFKIAGTRKGITAIQLDLKISGIDFDIIREVLERSRTARHFILDK
MTAVLEAPRKELSEYAPRIIHLKINQERIGDLIGPGGKNIRKIIELTGVAIDVEDDGSVL
VASTDSAASQRAVDMIKGLTEDAEIGKIYRGKVKRIMNFGAFVEILPNKEGLCHVKELDD
KYVKNVEDVVKIGDEIDVKVISIDELGRINLSKKQAKSEK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaaaatcgaaaaagtggaagccccatttggggacaagaatttgattttatcg
acgggaaaactggccaagcaggctgacggcgccgtgaccgtgcagatgggcgattcggtg
gtcctcgtgacggcctgtgtgtccaaggacatcagggaagggatcgatttttttcctttg
accgtcgaataccaggaaaagacttatgccgcaggcaggatccccggagggttcttcaag
cgcgaaggccgtccatcggagagcgagatcctgatctcgcgcctcatcgacaggccggtc
cgtcccttatttccatgcggtttcaggaatgacgtccaggtgatcgctctggtcctttcc
agcgacgcagagaatgatcccgacgtcctggctgttatcggcgcctccgcggccctgggg
atctcgcagattccttttgaagggccgattggcgccgtccgtatcggacgcgtggatggt
aagctggtcgttaatccgacgtatgcccagcgcgaagcgagcgacttggacttggtcgtt
gtgggcaaccgtaaaaaagtcatcatgatcgaaggagaggccaaggggctggaagaagcg
gtggtgtatgaagccttgaaattcggccacgagcagcttcaggtttccattaagatccag
gaggatttgattaaggcgtgcggccgggaaaagatgagctatgaagaccgcgccgtcagc
ccggagctcgtcaagagcatcaaagccgcttatatgaatcgcgtgaaagagaattgcaag
atcgctcagaaagaagcgcgtatggaagcggtccagatgctttataaagatgtgacggaa
cgtttttgcgttgagaaagagggggaagaccagatcagcgagaaggatattaaggcagcc
ctggatgagatagaaagcgaagagatccgtaagcttgcgctggaagagaatcgccgcgta
gacggccgcaaattcgacgaggtccgtgccatcagttgtgaggtcggtaatttgccgcgg
acgcacggttcgggattgtttacccgtggacagacacaaagcctggcggtgaccactctg
ggcacgcgtgcggatgaacaactcatcgaagccctggaaggcaagagctataagaagttt
atgctccattataattttcctccgttttctgtcggcgaagtcaagcctgtcaggggggcc
ggccggcgtgaaatcggccacggcgccctggcggaaaagtccttgaaggcggtcatgccg
acgccggaagaattcccttacaccgtgcgcgtcgtttccgagatcctggagtccaatggg
tcttcgagcatggcgacggtctgtgcatcgtctttgtctttgatggatgcgggcgtgccg
atcaaagaacctgtcgcagggatcgctatggggctggtgcaagaggattccaagcatctc
cttttgacggatatcgccggcctggaagatcatcacggggacatggatttcaagatcgcc
ggtacccgcaaggggatcacggcgatccagctggacctgaagatcagcggcattgatttt
gatatcatccgcgaagtgctggagcgttccagaaccgcacgtcattttatccttgataag
atgacggccgtcctggaggcgccgcgcaaggagctttcggaatacgcgccgcggatcatc
cacctgaagatcaatcaggagcggatcggcgatttgatcgggccgggcggcaagaatatc
cgcaagatcatcgagctgacgggcgtcgccatcgacgtcgaggatgacggttcggtcctc
gtggcatcgacggacagcgccgcatcccagagggccgtcgacatgatcaagggcctcacc
gaagacgccgagatcggcaagatctacaggggcaaggtcaagcgcatcatgaatttcggg
gcgtttgtcgagatcctgcccaacaaggaagggctttgccacgtcaaggaactcgacgat
aaatacgtcaagaacgtcgaggatgtcgtcaagatcggcgacgagatcgatgtgaaggtc
atcagtatcgatgagctcggccgcatcaatctgagcaaaaaacaggccaagtccgaaaaa
taa
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