Verticillium alfalfae: VDBG_00036
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Entry
VDBG_00036 CDS
T02227
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 5
KO
K15147
mediator of RNA polymerase II transcription subunit 5
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_00036
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
VDBG_00036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med5
SSF
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
9528458
NCBI-ProteinID:
XP_003008355
UniProt:
C9S8B9
LinkDB
All DBs
AA seq
1039 aa
AA seq
DB search
MEGRASRSAQQIGLSRWQKFIANSLAKRLDPERFESYAPILYSKHPLPPAIIADLFLRPR
SGNRQFLDPRIPQYLQSLSKLRYIDIPSVLKGLYRYSTSHTQAHPTNGQGLEGDGEATRL
IRWGSSYGSEEVMFYRLTKAVAQGAAIQNAAVALEIAKIMSKWMTLFTDASTAFAVDPMG
QMQANQARDEMDCARAAFVALLLGVCENQVVLKALSRPQAAAARKAMSEGLATFVPTIMH
NAGPVTTRLDHFRTRTLTNFEPAEAGKPLAAPELDQLFDSGVELNNFVIPELPVANSRAG
LYIYLNAALVGRPLIDDTAVFNYLNNRYQGDVQSTTIDLILASFDVLANAVFRNEGNKAA
HMLRSYLMNKLPILISNLSKHMYPPLTAEYCITEALSHVDTNAFPTLSSMFDESRNNNPY
TDSVREEFCWACCLHGLLRESSIETILGETPYQSLPSRGRYVKDTLVAECLDDPERMQAL
VKELDNMDGNVGAVCHALTEVLAQLCRNKETMSLKNLCSQLSRRPLSLDVILLFEKPTAI
LQPLCDLLDDWKYDEDQGEYQPVYEEFGSVLLLLLAFAYRYNLTASDIGARSPDSFVAKF
LGQGHLSRSSEELSDLEKSHLGGWIHGLFDQEAGGLTDDLISSCPPQEFYLLIPTLFQNV
VTAFATGHLSEESLKGGVEYLVDTFLLPSLVTAITYLANSLWVERHNQNTIIRVLHLVLQ
PSAISEEAKTMLSSVLNIVAKPLEHSLRASQRQDPKNQKIDPLLGVLKDNIPLSRRTGGA
DHNELETWTSTQGEGLATALRHTMQGFVQWSLHPGINITPTSYSHRQVLAALRLLGAKRV
LRLICEEVKQQTEAGGGSVVYDVATALVCAPEVTNNPQTPGLTFFEDSGNVPAPVQRRLT
LRDVLKAEAEDSRRLQRTDMSQAELVVRLHRRVEAQMAVSEAEAIHAEAILQGDLGLGLD
DAAGSLSEAMAAAAANAGPTGGAMTVDSVGLDLGMGGVGGDLDLGDATGNGGSLDLGADD
IFSGLSAGGDFEWDTMDLG
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtcgcgcttcgagaagcgcccagcagattggcctttctcgatggcagaagttc
atagccaactcactggcaaagcgactagaccccgagcgattcgagtcctatgccccaata
ctctactcaaaacatccgctgccgccggctatcattgccgacttattcttgcgcccgcgc
tctggcaaccgacagttcctcgacccccgcatcccacaataccttcagagcctctcgaaa
ctgcgatacatcgatattccctccgtgctgaaaggcctctacagatactcgacatcgcac
acacaagcacatcctaccaatgggcagggtctagagggagatggcgaggccactcgtctt
atccgatgggggagctcatatggttcagaggaggtcatgttctatcgcttgaccaaggct
gtggcacaaggggcagctatacagaatgccgcggtcgctttagaaatcgccaaaatcatg
tcgaaatggatgaccctatttacggatgcgtcgactgcctttgcagttgatcccatgggg
caaatgcaggcgaatcaagcccgagacgagatggattgtgcacgtgcggccttcgtcgcc
ctgttgctcggggtttgcgagaatcaggtagtgctgaaagcattgagcaggccacaggct
gcagctgctcgaaaggccatgtctgaaggtcttgcaacatttgttcccaccattatgcac
aacgctggtcctgtgacaacgcggctcgaccactttcgaacgagaacactgaccaatttt
gagccggcggaggcaggcaagccacttgccgctccagaactggatcagctcttcgactct
ggggtcgagctcaacaacttcgtcatcccagaactcccagtcgccaactcaagagcagga
ctatacatttacctgaacgccgctcttgttggtcgcccattaatcgacgacacagccgtc
ttcaactatctgaacaaccgctaccagggcgacgtgcaatccaccaccatcgatcttatt
ctggcgtcattcgacgtgttggccaatgcagtcttccgcaacgaggggaacaaagctgca
catatgctgaggtcttatctcatgaacaagctccccatcctcatttcaaacctgagcaag
cacatgtacccgccgttgacggccgagtactgcatcaccgaagcgctgagccacgtcgac
accaatgctttccctacgctctcgtcgatgtttgatgagagtcgaaacaataatccttac
accgactcggtccgggaagaattttgctgggcatgctgtttgcacggcttgctacgagaa
agcagcatagaaacgatcctgggcgagacgccataccagtccttaccctcccgaggcaga
tatgtcaaagacacgctcgtcgcagaatgtctggacgacccggagcgcatgcaggctctc
gttaaggagctagataacatggatgggaacgtgggtgctgtctgccacgctttgacagag
gtcttggctcagttgtgccgcaacaaggagacgatgtcattgaagaacctctgcagtcaa
ctgtctcgcaggccattgtcactggacgtcatacttcttttcgaaaagccaactgctatt
ttgcagccattgtgcgatttactcgacgactggaagtatgacgaggatcaaggcgagtac
cagcctgtctacgaagaatttggatccgtcctccttctcctactcgcctttgcctaccgc
tacaaccttacggcatccgatattggtgcacgatctccggattcgtttgtggcgaaattc
ctcggtcaaggccacctgagtcgatcctccgaggagctttcggacctggagaagagccat
ctgggtggttggatccatggtcttttcgaccaggaagctggtggcctgacagacgacttg
atatcatcttgtccaccacaagagttctacctcttaatcccgaccttgttccaaaacgtt
gtcacagcctttgccaccggtcacctttcagaagagagtctgaaaggtggtgttgaatac
ctcgtagacacgtttctgctcccttcactggttactgcgattacctacctggcaaactcg
ctgtgggtcgaacggcacaaccagaacaccatcatcagggttctccacctagtgttgcag
cccagcgcgatttccgaagaagcaaaaaccatgctctcgtcagtcctcaatattgtggcc
aagcccttggagcactcgctcagggcttctcaacggcaggaccccaagaaccaaaagatc
gaccctctcctcggcgtattaaaagacaacattccactgtcacgccgcacaggcggagca
gaccacaacgagctggagacgtggacgagtacgcagggcgaaggccttgcgacggccttg
cgccacacaatgcaaggttttgtgcagtggagtctgcacccgggcatcaacatcacgccc
acatcgtactcgcatcgtcaggtcttggctgcgctccggctactgggggcgaagcgggtg
cttcgcttgatctgtgaggaggtcaagcagcaaacagaagccggcggcggcagtgttgtg
tacgatgtggctacggcactcgtttgtgctccggaggttacaaacaaccctcaaacgcca
gggttgaccttctttgaggattcggggaacgtaccggcgcccgtgcagaggcggctgacg
ctgcgggacgtgctgaaggccgaggcggaagacagcaggcgactacagaggactgacatg
agccaggctgagctggtcgtgcggctccatcggcgcgtcgaagcccagatggccgtgtcc
gaagctgaggccatccatgcggaggccatcctgcagggcgacctgggcctgggtctggat
gatgcggcaggctctttgagcgaggccatggcggccgcggctgccaacgcgggaccgact
ggcggtgccatgacggttgatagcgtcggcctggacctgggcatgggcggcgtcggcggc
gacctggatttaggcgatgcaactggcaacggcggctcattggatctgggggctgacgac
attttcagcggtctgtccgctggtggtgatttcgagtgggatacgatggatcttggctaa
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