Verticillium alfalfae: VDBG_00188
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Entry
VDBG_00188 CDS
T02227
Name
(RefSeq) 80 kD MCM3-associated protein
KO
K23719
nuclear mRNA export protein SAC3
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_00188
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
VDBG_00188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAC3_GANP
NDUS4
Motif
Other DBs
NCBI-GeneID:
9528614
NCBI-ProteinID:
XP_003008507
UniProt:
C9S933
LinkDB
All DBs
AA seq
683 aa
AA seq
DB search
MAPLARELQFQVLQHPASSRKSPRVTSNRSSPTTASTHQHHHPTFGRRSLKPRIFGALAP
SAADIAEPSITGLDGAGDVRWAKRNRTTTERDTMNGFGSKRRAGSPADGASSDDGRKRKG
NGALDRKKKATTTNGKNKNTSKPRPSNVTAFGADTTNYDTDPGTYDTEANSTYAKRIYEQ
LRKDRILPPKWPSDPGNPASKGAMAKYRETSKSYRDRARASLMAAGLIDDPDKPKRLEDA
IDFKGICEDMCPNFEKITRITEFDVQHAEKDPQTSFPVISKMVKKLARSAAGQEAPLPMD
VRSTAALRRTLDYLVDDLLEDEDNLPILHGYLWDRTRAIRRDFIFHSSMSAEEMKDQVYC
LETIARFHVTSLHLLSRPDVTPEDFSEQQEIEQLGKALLSLMHAYDDSKAQGLVCENETE
FRAYQLLFSANQPNILDNVQQEWANPRLWKDSDEIRTAVSLVEALQSTTDLHGPMGTAPH
LAVSGAYNTYFKIVENPGVSYTMACFAEIHFGQLRRSMLKTLRRAYWRPKVLARDITPAL
LNTFLRFDTEDEAIDFVEEHGMSWVPLEDSPDDEYRQYLRTTDGMEFPRLHHTTSETIVE
KKRGSRSLSEVIHRSVYEDPSATATSNRVGTEKPFLRSIAKSQSTPNASAFQGFQKPTNG
FATAQPTETPSSQGTIIYMWHIN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggctccacttgcgcgcgagctacagttccaggtgctacaacatccagcctcgtcacga
aaatctccccgagtgacgtccaatcgttcatccccaaccaccgcttcaacccatcaacac
caccatcccaccttcggtcgccgcagcctcaagccgcgcatcttcggcgcactcgctcca
agcgccgctgacatcgcagagcccagcatcactggcctcgatggcgcgggcgacgtccgt
tgggccaagcgcaaccgaacgacgacagagcgcgacacgatgaacggcttcggatccaag
cgacgagccggcagtcccgcggacggcgcaagctccgacgatggtcggaaacgcaagggc
aatggtgccctcgaccgcaaaaagaaggcgacgacgacgaacggcaagaacaagaacact
tcgaagcctcgaccatccaacgtgaccgcttttggcgccgacacgaccaactatgacacc
gatcccggcacctacgataccgaagcaaacagcacgtatgccaagcgaatctacgagcag
ctgcgaaaggacagaatcctcccaccgaaatggccgtccgatcccgggaacccagcgtcc
aagggcgccatggcaaaatacagagagacatccaagtcgtatcgcgaccgggcgcgcgct
tccttgatggctgctggcctgattgacgaccccgacaagccaaaacgcctggaggacgcc
attgacttcaagggcatctgcgaggatatgtgccccaatttcgaaaagatcacgcgtatc
accgagtttgatgtgcaacatgccgaaaaggatccgcagacgtcgtttcccgtcatcagc
aagatggtgaagaaactggccagatcggcggcaggccaggaagctcccctaccaatggac
gttcgatcgactgcagcactccgccggacgctcgactatttggtggacgacctcctcgag
gacgaagacaatctgccaatcctgcacggctatctatgggatcgcacgcgagccattcga
cgcgacttcatcttccactcaagcatgagcgccgaagagatgaaggaccaagtctactgc
ctcgagacgattgcgcgcttccacgtcacttcgctgcacctgctctcccgccccgacgtg
acgccagaggacttttcggagcagcaagagatcgaacagctgggcaaagcattgctttca
ctgatgcacgcctacgacgacagcaaggcgcaaggccttgtttgcgaaaacgaaacagag
ttcagggcctaccagcttctcttcagcgccaatcaaccaaatatcctcgacaacgtccag
caggaatgggcgaaccctcgactatggaaggactctgacgagatcagaaccgccgtctct
ctagtcgaggcattgcagagcactactgatttgcacggccctatgggtaccgcgccgcac
ctggcggtgtcaggagcctacaacacgtacttcaagatcgtcgagaaccccggagtgtcc
tataccatggcctgttttgcggaaattcactttggccagctgcggcgatcgatgctcaag
accttacgacgagcttactggagaccgaaagttttggcgagggacatcacgcccgcatta
ctaaataccttcctgaggttcgacaccgaggacgaagcaattgattttgtcgaggaacac
gggatgagctgggtccctcttgaggattcgccggacgacgaatacagacaatacctgagg
acgaccgatggtatggagttcccgcggcttcatcacacaacctcagaaaccattgtagag
aagaagcgaggttctcgaagtctttccgaagttatccaccgctcagtatacgaagatcct
tcagcaacggcgacttcgaaccgggtcggtaccgagaagccgttcttgcggagtatagca
aagtcacagagcacgcctaatgcttcggcatttcagggctttcagaagccgacaaacggt
ttcgcaactgcccaaccaacagaaacaccctccagccaaggtactatcatctatatgtgg
cacattaattga
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