Verticillium alfalfae: VDBG_00233
Help
Entry
VDBG_00233 CDS
T02227
Name
(RefSeq) topoisomerase 1-associated factor 1
KO
K10997
replication fork protection complex subunit TIMELESS/Tof1/Swi1
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_00233
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_00233
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Fork protection complex
VDBG_00233
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
Check point factors
FPC (fork protection complex)
VDBG_00233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIMELESS
EPCAM-Trop-2_C
Motif
Other DBs
NCBI-GeneID:
9528660
NCBI-ProteinID:
XP_003008552
UniProt:
C9S978
LinkDB
All DBs
AA seq
1413 aa
AA seq
DB search
MEMPDGTTDIVHPEVRAHINSLVSALGGISADDDGRYNLGDDALEVLRDLKKWIRFYDEK
TNRMDVARCIAEANLIDGDLLPILATWPENSTDNKFRSRIALACFEIMVPLTWPVERDPE
QTTVNHHRHMPALQLAQVGYKRSIINFDGARILHAAARVALPAMAAPIGERTPRDQGIIK
LVLFFLRNVAMIEPQPNVKYEGEESQISRSATIDAFSYQDIFMVLLTIASNMGEDFRTED
VTIMEIIYHLVKRVDVKKLFMSEQQVNKAKADELSVMMGKENAMLKAQNRKGPTRHNRFG
TVIWVKRADGKMTAVSGQEALVDVASRRKKMDETKKFKPPRKARSKTDSHMKDLGELPKL
DARAYSQLRSFVEEFLDAGFNPLFEHVRKSIDREASHVLSYHRRQFLYLVAWFLEAERTR
KSSQRASAPKNSAEEVSSFNLVAAVLNQSTFITLNRTMTQAWEHKDWPELTASMRCLTQI
LLTVQEMSHSPNEDDQEIAENTLSRLFYEDAMHDLIANVVRQYKEQGFDYLDAATELTHH
FLRILEAYSKQNVDMQVRSRRRTRRKKKAAKEASADGEGDEDEADDSGDDEKNAELTTKE
RKFDFQRFSARFTPQGVVDTFVAFTKFYKDLSDEQLKRAHRYFYRVAFKHDASVMLFRVD
IVHLLHEMVKGPEPLDKASSMYKEWEELAKQILRKCFKKIDERPALLIEMLFSKISSTAH
YLEYGFEKQTISTSRPRPAADLEFKYTEDREQQMAIAVGVLLDKSQSDHIAWVKKILTNA
EQERRALAAAEEILPSVEATGDNDEPVDKPADSFMPYTARPDNDARQAAMFKNAHLRLLM
RLAGLERHAPAIDESPDSLWVVPASATPDQLRETLDLINKAEFSPPVFEEGVLAEHQLRR
KTATRKKAQYDDDDGEGEDDDDDEDGDVANAALFPAGGPTERKVVNGKKKKKNKTRHVRK
RRERDPDASGSDDDDEAARDRARARRERERAKLEKIKSQLYVAASDDETDDERDAAFFAR
EEAQLQEKQHSVTVSQFLLAVSPARPPRRRGAHGPFHVVGSSGWSAVCASYVLHDERLAR
GLRSAAQHVARLDDMGARQVALLVCFGASLLDGESFGVEGAWGRGRGKGRPRIPATPREA
KQEEVPVKARRLSKRKLGALCDERGDYCEEDGQKNGKGQSQENVANADVPEIDEPVAVRR
RQEGDADERQGCAVVLEEDADVMVEETARPELAADVRDHEDEQGSNDGQVEARSVGESLE
HLDALLQIDEGDVEAKDVTGEAGDPSQPVARVGDGKNPVEDERPDTDPTHEGEIVDTSGL
HDVVDGAVEVRIGPDQIIGRGGEDDGPLLGGDVVVGVSNTVSAERGSVSTGRGTSGAGSA
APILVSSVLAETMATVVDRAEACSGGLLWLMLG
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggagatgccggatgggacaacagacatcgtccatcccgaagtacgggcgcacatcaac
agcttagtctccgctctcggtggcatcagcgcagatgatgacggacgctacaacctggga
gacgacgctctcgaggtcctccgcgacttgaagaaatggatacgattttacgacgagaag
acgaaccgcatggacgtcgcacgatgcatcgcggaagccaacctgatcgatggcgacctg
cttcccatcctggcgacatggcccgagaattccaccgacaacaagttcagatcgaggatc
gcactcgcatgcttcgagatcatggtgccgctgacgtggcctgtggagcgcgatcccgag
cagacgacagtcaaccatcaccgacacatgcccgccctgcagctcgcacaagtcggctac
aaacgatccatcatcaactttgacggtgcgcggatcctgcacgccgcagccagggttgcc
ctcccggccatggccgcgccgattggggagcgcaccccgcgagaccagggcatcatcaag
ctggtgctcttcttcttgaggaatgtcgccatgatcgagccccagccaaacgtcaaatat
gagggcgaggagtcacagatctctcgctcggctacgattgacgccttctcctaccaagac
atcttcatggtcctcctgaccatcgcatccaacatgggcgaggacttccggaccgaggac
gtgaccatcatggagatcatctaccatctcgtcaagcgcgttgacgtcaaaaagctgttc
atgagtgagcagcaggtcaacaaggccaaggcggatgagctgtcggtcatgatgggcaag
gagaatgcaatgctcaaggcccagaaccgcaaggggcccacacgtcacaaccgcttcggc
acggtcatctgggtgaagcgcgccgacggcaagatgactgcagtctccggacaggaagct
ctggtggatgtggcctcgaggcggaagaagatggacgagacgaaaaagttcaagccgccc
cgcaaggccaggtcaaagacggactcgcacatgaaggatctaggcgagctgccgaagctg
gatgctcgtgcctactctcagctgaggagttttgtcgaggaattcctggatgccggcttc
aaccccttatttgagcatgtcagaaagtccatcgaccgcgaggcctcacacgtgctgtca
taccaccggagacagtttctgtatctggtggcgtggttcttggaggcggagcgaacccgg
aagagctcgcagcgcgcttctgcgccgaagaattcggcagaggaagtcagcagcttcaac
ctggtcgccgccgtcctcaaccagtccacctttatcactctcaacaggaccatgacccag
gcctgggagcataaggactggccagaattgaccgcctcaatgaggtgtctcacgcagatc
ctgctgacggtgcaggagatgtcccattcgcccaacgaggacgaccaggagatcgcggag
aatacactgagccgtctgttctacgaagacgccatgcacgatctgatagccaacgtcgtg
agacagtacaaggagcagggtttcgactatctcgatgccgccacggagctgacacatcac
ttcctacgcatcttggaggcatactcaaagcaaaacgtggacatgcaagtccggtctcgg
cggaggacgaggcgcaagaagaaggcggccaaagaagcgtcggccgatggcgagggcgac
gaagacgaagccgatgattccggggacgatgagaagaacgccgagctgaccaccaaggag
cgcaagttcgactttcagcggttcagcgcccgtttcacgccacaaggcgtcgtcgacacg
tttgtggcatttaccaagttttacaaagatctcagcgacgagcaacttaagcgcgcccac
cgctacttctaccgcgtggccttcaagcacgacgcgagcgtcatgctgttccgcgtggac
attgtccacctcctccacgagatggtcaagggccctgaacctctggacaaggcgtcgagc
atgtacaaggagtgggaggagctggcgaagcagatcctgcgcaagtgcttcaagaagatc
gacgagaggccggccctcctcatcgagatgctcttctccaagattagcagcacggcgcac
tacctcgaatacggctttgagaagcagacaatctcaacgtcaaggccccgacccgcagct
gatctcgagttcaagtacaccgaggaccgcgagcagcagatggccatcgccgttggtgtg
cttctcgacaagagccagtcggaccacatcgcgtgggtcaagaagatcctcaccaacgcc
gagcaggagcgccgcgctctcgcggcagcagaagagatcctcccctccgtcgaggcaacg
ggcgacaacgacgagccggtcgacaagccagcagacagcttcatgccgtacactgcccgt
cccgacaacgatgcccgccaggcagccatgttcaagaatgcccacctccgcctcctcatg
cgcctcgcagggctcgagcgtcacgctcccgccatcgacgagtctcccgacagcctctgg
gtcgtccccgcgtcggcgaccccggaccagctgcgcgagacgctcgatctcatcaacaag
gccgagttcagcccgcccgtcttcgaagagggcgtcctcgccgagcaccagctccgccgc
aagacggccacgcgcaaaaaggcgcagtacgacgacgacgacggcgagggcgaggacgac
gacgacgatgaagacggcgacgtcgccaacgcagccctcttccccgccggcggaccgaca
gagcgcaaggtcgtcaacggcaagaagaagaagaagaacaagacaaggcatgtccgcaaa
cgccgcgaacgggacccggatgcctcgggctccgacgacgatgacgaagcggcccgggac
cgggcgcgcgcccgccgcgagagggagagggccaagctggagaagatcaagtcgcagctc
tacgtcgcggcgagcgacgacgagacggacgacgagcgcgatgccgccttcttcgcgcgc
gaggaggcgcagctccaggagaagcaacactccgtcacggtgtcgcagttcttgctcgct
gtatctcctgctcggcctcctcggcgccgtggcgctcacggccctttccacgtcgtcggc
tccagcggctggtccgccgtatgcgcctcctacgttctccatgatgaacgccttgcgcga
ggtttgagaagcgctgctcaacacgtggctcggctcgacgacatgggagcccgtcaggtt
gcccttctcgtctgtttcggggcgagccttcttgacggtgagagcttcggtgtggaaggg
gcttgggggagaggtaggggaaaaggaaggccgaggataccggcgacaccaagggaggcc
aagcaggaagaagtcccagtgaaagccaggaggctttcgaagaggaaactcggtgccttg
tgcgatgagcgaggagactattgcgaagaggatggtcagaagaatggcaaagggcagagc
caggaaaatgtcgccaacgctgatgttccagaaatcgacgagccagtcgcggtccgccgt
cggcaagaaggcgacgctgatgagcgtcaagggtgtgccgtagtccttgaggaagacgcg
gatgtgatggtggaagagaccgctcgtcccgagctcgccgcagatgtacgcgaccatgaa
gacgagcagggcagcaacgatggacaggtagaagccaggtccgtcggggagtcgctcgag
cacctggatgcccttctgcagatagatgaaggcgacgtagaagccaaagatgtcacaggg
gaagcgggtgacccatcgcagccagttgcacgagttggtgatggcaagaatccagtggag
gatgagcgaccagataccgatccaacacatgaaggcgagatagttgacaccagtgggctc
catgatgtcgtagacggtgctgtcgaggtcaggattggcccagatcagatcattggtaga
gggggggaagacgatgggccgttgttgggaggtgatgttgtggtgggggtctcgaacaca
gtctcggcagaacgaggctcagtatcgacaggacgaggaacgtcgggagccgggtcagcg
gcacccatcttggtgtcgtccgtgctggcagagaccatggccacggttgtggaccgagca
gaggcttgcagcggaggcctgctgtggttgatgcttgggtaa
DBGET
integrated database retrieval system
