Verticillium alfalfae: VDBG_00250
Help
Entry
VDBG_00250 CDS
T02227
Name
(RefSeq) pre-mRNA-processing protein
KO
K06063
SNW domain-containing protein 1
Organism
val
Verticillium alfalfae
Pathway
val03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDBG_00250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
val03041
]
VDBG_00250
Spliceosome [BR:
val03041
]
Complex B
Other components
Prp19-related factors
VDBG_00250
Complex C
VDBG_00250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spem1
Motif
Other DBs
NCBI-GeneID:
9528758
NCBI-ProteinID:
XP_003008569
UniProt:
C9S543
LinkDB
All DBs
AA seq
397 aa
AA seq
DB search
MASISAALASALPTPKYTGEDDAPAHAQQRGPRIVGAGHLDQTQVVLRRTGPPPYGQRTG
WRPSGQEDFGDGGAFPEVPVAQYPLSMGQKSATASNALAVQVDAEGKVDYGAIARQGHND
SRIIHASFKDLIPLRQRADAGEIDLARPSRDEVAATTEKTKNALAALVSGAVAAQKPKNI
NVGNRADPTFVRYTPATRWATTRRSRTRARKDKMREEERKLRQSRMGAERRVQVMAREQN
RDISEKIALGLAKPTQSKETMYDSRLFNQSSGFDSGFNEDNPYDKPLFAAQDAISSIYRP
KANMDEDEDEAAGDKEMAKIQKASRFGEALGRGTFKGAEEAEAREGPVQFEKETADPFNV
DKFLSEVEQSSTAKRGYGLQEDESRQTKRARVDDEDD
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcatccatatcggctgctctcgcctcggcactcccgacaccaaagtacaccggcgaa
gacgacgcccctgcacacgcccagcagcgcggcccgcgcatcgtcggtgcaggacacctc
gaccagacccaggtcgtgctgaggagaacaggaccacccccctatggccagcggacggga
tggcggccgagcggccaggaggactttggcgacggcggcgcgttccccgaggtgcctgtc
gcccagtaccctctgtcgatgggccaaaagtcggcgacggcaagcaacgccctcgccgtc
caggtcgacgccgagggcaaggtcgactacggtgccatcgcccgccagggccacaacgac
agccgcatcatccacgcgtccttcaaggacctcatccccctccgacagcgtgccgacgcc
ggcgagattgacctcgcgcgccccagccgcgacgaggtcgccgcgacgaccgagaagacg
aagaacgccctcgctgccctcgtcagcggcgccgtcgccgcccagaagcccaagaacatc
aacgtcggcaaccgcgccgacccgacctttgtgcgctacacgccggcaaccagatgggcg
acaacgcgaagaagcaggaccagggcgcgcaaggacaagatgcgcgaggaggagaggaag
ctgcgccagtcgcgcatgggcgccgagaggagggtccaggtcatggcgcgcgagcagaac
cgtgacatatccgagaagattgccctcggcctggccaagcctacgcagtccaaggagacc
atgtacgactcgcgcctgttcaaccagtcaagcggattcgacagcggcttcaacgaggac
aacccctacgacaagccgctgtttgcggcccaagacgccatcagcagcatctaccggccc
aaggcaaatatggacgaggacgaggacgaggcggcgggcgacaaggagatggccaagatt
cagaaagcgagccggttcggcgaggccctcggcagggggacgtttaagggtgccgaggag
gcagaggcacgagagggtccagtacagtttgaaaaagagacggcggatccgttcaacgtc
gacaagttcctgtcagaggtcgagcagagctcaactgcgaagaggggctacggcctgcaa
gaggacgagtcgcggcagacaaagcgcgcgagggtggacgacgaggacgactga
DBGET
integrated database retrieval system