KEGG   Verticillium alfalfae: VDBG_00250
Entry
VDBG_00250        CDS       T02227                                 
Name
(RefSeq) pre-mRNA-processing protein
  KO
K06063  SNW domain-containing protein 1
Organism
val  Verticillium alfalfae
Pathway
val03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDBG_00250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:val03041]
    VDBG_00250
Spliceosome [BR:val03041]
 Complex B
  Other components
   Prp19-related factors
    VDBG_00250
 Complex C
    VDBG_00250
SSDB
Motif
Pfam: Spem1
Other DBs
NCBI-GeneID: 9528758
NCBI-ProteinID: XP_003008569
UniProt: C9S543
LinkDB
AA seq 397 aa
MASISAALASALPTPKYTGEDDAPAHAQQRGPRIVGAGHLDQTQVVLRRTGPPPYGQRTG
WRPSGQEDFGDGGAFPEVPVAQYPLSMGQKSATASNALAVQVDAEGKVDYGAIARQGHND
SRIIHASFKDLIPLRQRADAGEIDLARPSRDEVAATTEKTKNALAALVSGAVAAQKPKNI
NVGNRADPTFVRYTPATRWATTRRSRTRARKDKMREEERKLRQSRMGAERRVQVMAREQN
RDISEKIALGLAKPTQSKETMYDSRLFNQSSGFDSGFNEDNPYDKPLFAAQDAISSIYRP
KANMDEDEDEAAGDKEMAKIQKASRFGEALGRGTFKGAEEAEAREGPVQFEKETADPFNV
DKFLSEVEQSSTAKRGYGLQEDESRQTKRARVDDEDD
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggcatccatatcggctgctctcgcctcggcactcccgacaccaaagtacaccggcgaa
gacgacgcccctgcacacgcccagcagcgcggcccgcgcatcgtcggtgcaggacacctc
gaccagacccaggtcgtgctgaggagaacaggaccacccccctatggccagcggacggga
tggcggccgagcggccaggaggactttggcgacggcggcgcgttccccgaggtgcctgtc
gcccagtaccctctgtcgatgggccaaaagtcggcgacggcaagcaacgccctcgccgtc
caggtcgacgccgagggcaaggtcgactacggtgccatcgcccgccagggccacaacgac
agccgcatcatccacgcgtccttcaaggacctcatccccctccgacagcgtgccgacgcc
ggcgagattgacctcgcgcgccccagccgcgacgaggtcgccgcgacgaccgagaagacg
aagaacgccctcgctgccctcgtcagcggcgccgtcgccgcccagaagcccaagaacatc
aacgtcggcaaccgcgccgacccgacctttgtgcgctacacgccggcaaccagatgggcg
acaacgcgaagaagcaggaccagggcgcgcaaggacaagatgcgcgaggaggagaggaag
ctgcgccagtcgcgcatgggcgccgagaggagggtccaggtcatggcgcgcgagcagaac
cgtgacatatccgagaagattgccctcggcctggccaagcctacgcagtccaaggagacc
atgtacgactcgcgcctgttcaaccagtcaagcggattcgacagcggcttcaacgaggac
aacccctacgacaagccgctgtttgcggcccaagacgccatcagcagcatctaccggccc
aaggcaaatatggacgaggacgaggacgaggcggcgggcgacaaggagatggccaagatt
cagaaagcgagccggttcggcgaggccctcggcagggggacgtttaagggtgccgaggag
gcagaggcacgagagggtccagtacagtttgaaaaagagacggcggatccgttcaacgtc
gacaagttcctgtcagaggtcgagcagagctcaactgcgaagaggggctacggcctgcaa
gaggacgagtcgcggcagacaaagcgcgcgagggtggacgacgaggacgactga

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