Verticillium alfalfae: VDBG_00389
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Entry
VDBG_00389 CDS
T02227
Name
(RefSeq) pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val00040
Pentose and glucuronate interconversions
val01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDBG_00389
Enzymes [BR:
val01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
VDBG_00389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
9528899
NCBI-ProteinID:
XP_003008708
UniProt:
C9S5Q6
LinkDB
All DBs
AA seq
232 aa
AA seq
DB search
MTQLSLLRTLLLPGVLGRGPDDPHDEHDPHNRVTTSTIKLQASGGVSCPHPAVNTVWPTP
TGSTSYPTASVIPAGAVFDGRMALFDRKGSPGDCSGQKEQDEAAAVFILEPGATLRNAII
GPAQAEGVHCRGPCTIENVWWDDVCEDAATFKGAGPRYVRGGGAREASDKVFQHNVGVNQ
NYGDTAELSNYCLAKVGVVCTRYNGCVKPCEAGEVGEGELEPFCKINGDDWS
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgacccagctctccctcctccgcactctgctgctccctggcgtcctcggccgcgggcca
gacgacccgcacgacgagcacgacccgcacaaccgcgtcacgaccagcaccatcaagttg
caggcctccggcggcgtctcgtgccctcacccggctgtcaacacagtctggccgacgccg
acgggcagcacctcatacccgacagcgtcggtcatcccggccggcgccgtcttcgacggc
cgcatggccctcttcgaccgcaagggcagccccggcgactgcagcggccagaaggagcag
gacgaggccgccgccgtcttcatcctcgagcccggcgccacgctgcgcaacgccatcatc
ggccccgcccaggccgagggcgtccactgccgcgggccttgcaccattgagaacgtctgg
tgggatgacgtctgcgaggacgccgccaccttcaagggcgccggcccgcgttacgtccgc
ggcggtggcgcccgcgaggccagcgacaaggtcttccagcacaacgtgggcgtcaaccaa
aattatggagacaccgccgagctgtcaaactactgcctggccaaggttggcgtcgtctgc
acccgctacaacggatgtgtcaagccctgcgaggctggagaggttggcgagggcgagctc
gagcctttctgcaaaatcaatggcgatgactggagctaa
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