Verticillium alfalfae: VDBG_00393
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Entry
VDBG_00393 CDS
T02227
Name
(RefSeq) DUF907 domain-containing protein
KO
K28812
TRP-like calcium channel
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_00393
Transporters [BR:
val02000
]
Other transporters
Pores ion channels [TC:
1
]
VDBG_00393
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP
TRP_N
TMEMspv1-c74-12
Motif
Other DBs
NCBI-GeneID:
9528904
NCBI-ProteinID:
XP_003008712
UniProt:
C9S5R0
LinkDB
All DBs
AA seq
631 aa
AA seq
DB search
MRWSPLLLLLTALSPVMAIRKLESKSLNTCQSDSMFSASLFNVVFTPDNGTATVNIVAVS
SVQGSVVFDISLKAYGYEVIHRTIDPCDIDLAGLCPMTADKINLKFNIDIDEEATKVIPG
IAFSIPDLDATFRAYLNLTETGESVACVEADFSNGKTVDLVGVKWATALIAILGLIAAAV
VSGMGHTNAAAHLAANTLSLFGYFQAQAIIGLTGVHLPPVVQAWTQNFMWSMGIIRVGWM
QDVFTWYQRATGGEPSTLFNSMRTSSVQVTKRSVDFTEGAAGIMARAGTALAKRANIQLS
SGSFIVYGIQRVAFRAKIESTNLFMTGLTFYCIFAVLTVLVVALFKGFTELCVRQRWMKT
DSFLEFRNGWLTVLKGILFRVTLIGFPMMTILCLWELTQRDSPAEVVLAIFFFFGMLITL
GWASFKVIRIARRSVAMHRNPAYILYSDPQALNKWGFLYVQFRASAYYFIAPTLLYTLIK
GMFVAFGQHVGVVQAIAFMVIEAAALIAASVLRPWMDKSINSFNIAICVMNFLNSVFLFM
MTNVYAAPDIVPGATGVVLFIANAAFSLILLIMVIISSTIVFWRKNPDAKYQFMADDRVS
FMKSQTQLNTTTELDALPGRPVVTRAGTSAA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggtcaccgctcctccttctcttgacggccttgtcgcccgtcatggccatccgc
aagctcgagtccaagtcgctcaacacgtgccagtctgattccatgttctcggccagtctg
ttcaacgtcgtcttcacccccgacaacggtactgccactgtcaacattgtcgccgtctcc
tccgtccagggcagcgtcgtcttcgatatctcgctcaaggcatacggttacgaagtcatc
caccgtaccatcgacccctgtgacattgacctcgctggtctgtgccccatgaccgccgac
aagatcaacctcaagttcaacatcgacattgacgaggaggccaccaaggtcatccccggt
atcgccttctccatccccgatcttgatgccaccttccgcgcctacctcaacctgacggaa
accggcgagagtgttgcctgtgtcgaagccgacttctccaacggaaagacggtcgacctt
gtcggagtcaagtgggccactgctctcatcgccattctcggtctcattgctgccgctgtc
gtctctggcatgggtcacaccaacgccgccgctcacttggccgccaacacgctgtctctc
tttggttacttccaggcccaggccatcattggtctcaccggtgttcacctgccccccgtt
gtccaggcctggacccagaacttcatgtggtccatgggtatcattcgcgtcggctggatg
caggacgtcttcacctggtaccaacgtgccaccggcggtgagcccagcactctgttcaac
tcgatgaggacctcctccgtccaggtcaccaagcgatcggtcgactttactgagggtgcc
gctggcatcatggctcgtgctggcacggccctggccaagcgcgccaacattcagctcagc
tccggttccttcatcgtgtacggtatccagcgtgtcgccttccgcgccaagattgagtcg
accaacctcttcatgaccggccttaccttctactgcatcttcgccgtcctcaccgttctc
gtcgtcgctctcttcaagggtttcactgagctatgcgtcaggcagaggtggatgaagacc
gacagcttcctcgagttccgcaacggctggctcaccgtcctcaagggcatcttgttccgc
gtcacgctcattggtttccccatgatgacgatcctctgcctctgggagctcacgcagcgc
gactcgcccgccgaggttgtcctcgccatcttcttcttcttcggcatgttgatcaccctc
ggctgggcctcgttcaaggtcatccgcatcgctcgtcgctccgtcgccatgcaccgcaac
ccggcctacatcctctactcggacccccaggccctcaacaagtggggcttcctttacgtc
cagttccgcgcctcggcctactatttcatcgcccctactcttctctacaccctcatcaag
ggcatgttcgtcgcgttcggccagcacgttggagtcgtgcaggccatcgccttcatggtc
attgaggccgccgctctcatcgccgccagtgtcctgcgcccctggatggacaagagcatc
aactcgttcaacattgccatttgcgtcatgaacttcctcaactcggtcttcctcttcatg
atgaccaatgtctacgccgcacctgacattgtccccggcgccaccggtgtcgtgctgttc
attgccaacgccgccttctccctgattctgctcatcatggtcatcatctcgagcaccatt
gtcttctggcgcaagaaccccgatgccaagtaccagttcatggccgacgaccgtgtctct
ttcatgaagtcgcagacccagctgaacacgacgactgagctcgacgctctgccgggacgg
cctgtggtgacaagggcgggtacaagtgcagcttga
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