Verticillium alfalfae: VDBG_00464
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Entry
VDBG_00464 CDS
T02227
Name
(RefSeq) E3 ubiquitin-protein ligase pub1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
val
Verticillium alfalfae
Pathway
val04011
MAPK signaling pathway - yeast
val04120
Ubiquitin mediated proteolysis
val04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
VDBG_00464
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
VDBG_00464
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
VDBG_00464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_00464
04121 Ubiquitin system [BR:
val04121
]
VDBG_00464
03029 Mitochondrial biogenesis [BR:
val03029
]
VDBG_00464
Enzymes [BR:
val01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
VDBG_00464
Membrane trafficking [BR:
val04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
VDBG_00464
Ubiquitin system [BR:
val04121
]
Ubiquitin ligases (E3)
HECT type E3
VDBG_00464
Mitochondrial biogenesis [BR:
val03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
VDBG_00464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
TFIIA
C2
Motif
Other DBs
NCBI-GeneID:
9529056
NCBI-ProteinID:
XP_003008783
UniProt:
C9S618
LinkDB
All DBs
AA seq
791 aa
AA seq
DB search
MSSGFPRTPFAGHHCQWRPDQGRPRPQKRTLNRTGIKVMIVSVTEDTILAVQVFDQKKFK
KKDQGFLGVINVRIGNVIELAPDADDQMLTRDLKKSTDNLVVHGKLIINLSTNLATPARG
QTAAPNRPGPPPSANASSLSTPQTDNRPGSAMENPSSTLAPGSATNLPLRPASVTPGGPP
PPAAGAAPATGSTPRPTSQLSPFEDGQGRLPAGWERREDNLGRTYYVDHNTRTTNWNRPT
AAGAAEQQNNREAATQVERQRHQNRTLPEDRTGANSPTQQQQQQQVQQAAQASNNQTMMH
TGATSPGTGELPPGWEQRWTPEGRPYFVDHNTRTTTWVDPRRQQYIRMYGGQNNQNGTIQ
QQPVSQLGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSSLDQNVPQYKRDFRRKL
IYFRSQPAMRILSGQCHIKVRRSHIFEDSFAEISRQSATDLKKRLMIKFDGEDGLDYGGL
SREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGINPEHLNYFKFIGRVVGLAIFHR
RFLDAFFIGALYKMILGKSVVLADMEGVDADFHRSLQWMLDNDISGGILEQTFSTEDERF
GVICVEDLKPDGRNIDVDNDNKKEYVDLMVKWRIEKRIAEQFQAFQTGFHELIPQDLINV
FDERELELLIGGIAEIDVDDWKKHTDYRGYTESDEVVQFFWQTIRSWDGEQKSRLLQFAT
GTSRIPVNGFKDLQGSDGPRRFTIEKAGEVNNLPKAHTCFNRLDLPPYKNLEALQQKLTI
AVEETMGFGQE
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccggtttcccccgaaccccttttgccggtcatcactgccaatggcgaccagac
caaggacgaccacggccccaaaagagaacgttgaaccgaactggaattaaagttatgatt
gtatcggtcaccgaagataccattttggcggtacaggtctttgaccagaagaagtttaag
aagaaggaccagggcttcttgggcgtcatcaatgttcgcatcggcaacgtcatcgagctc
gcccctgatgcagacgaccagatgctcacccgtgacctcaaaaagtcgaccgacaacttg
gtcgtccacggaaagctcattatcaacctatccacaaacctggcaacccccgctcgcggc
cagaccgctgcgccaaaccgccccggtccgcctccctctgcgaatgcatcgagcctgtcc
accccgcaaaccgacaacagaccgggctcggccatggagaacccctcgagcactctggcg
cccggatctgccaccaacctgcctctacgacccgccagcgtgacaccaggcggtcctcca
cctcccgctgctggcgcagccccggctaccggttcgactcctcgacccacaagccaattg
agcccctttgaggatggacaagggcggctgccagcaggctgggagcgccgggaagacaac
ctgggacggacgtattacgttgaccacaacacgaggacgaccaactggaaccgtcccacg
gctgccggtgctgccgagcaacaaaacaaccgtgaggcggctacgcaggtcgaacgccag
cgtcatcagaaccgaactctacccgaagaccgcaccggggccaactcgccgacgcagcag
cagcagcagcagcaggttcagcaggccgcacaagcttcaaacaaccagaccatgatgcac
accggtgccaccagcccgggaaccggtgagcttcctcccggatgggaacagaggtggacg
cctgaaggtcgcccctactttgtcgaccacaacacaaggacgaccacctgggtcgacccg
cgacgccagcagtacatcaggatgtacggcggacagaacaaccagaatggcaccattcag
cagcaacccgtgtcgcaacttggccctcttcctagcggctgggagatgcgtctgacgaac
acggcgagggtgtactttgtcgaccataacaccaagacgacgacgtgggacgatcctcgc
ctcccttcatcgctcgaccaaaatgtaccgcagtacaagcgtgacttccgcaggaagctt
atctacttccgttcgcagcctgcgatgcgcatcctctccgggcagtgccacatcaaggtg
cggcgctcgcacatttttgaagactcgtttgccgagatatcaaggcagtcggcgacggat
ctgaagaagaggctgatgatcaagttcgatggagaggacggtcttgattacggcggtctt
tctcgtgaatttttcttcctcctgtcccacgaaatgttcaaccccttctactgtcttttc
gaatactcagcgcacgacaactatacccttcagatcaaccctcactctggcatcaacccc
gagcatctcaattacttcaagttcatcggacgcgttgttggtctggccatcttccaccga
cgcttcctcgacgccttcttcatcggcgccctatacaagatgatcctcggcaagtccgtc
gtgcttgcggatatggagggcgtcgacgccgacttccacaggtcgctgcagtggatgctg
gacaacgatatctcgggcggtatcctcgagcagacgttttctacggaagacgagcgcttt
ggagtgatttgcgtcgaagacttgaagcccgatggccgcaacatcgatgtggacaacgac
aacaagaaggagtatgtcgatttgatggtcaaatggagaattgagaagcgcatcgccgag
caattccaggctttccagactggcttccacgaactcattccccaggacctcatcaacgtt
tttgacgaacgcgagctcgagttgcttattggtggtatcgctgaaattgacgttgacgac
tggaagaagcacactgactatcgcggctacactgaatcggatgaggttgtccagttcttt
tggcagaccatccgctcctgggacggagaacaaaagtcacgtctgctgcagtttgccacg
ggtacttcccgaatccctgtcaacggtttcaaggatcttcagggcagtgatggccccaga
cgcttcacgattgagaaggcgggcgaagtcaacaaccttcccaaagcgcacacatgtttc
aaccgcttggacctgccgccgtacaagaatctagaggcgctgcaacagaagctgacgatt
gctgttgaagagaccatgggctttggtcaggagtaa
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