Verticillium alfalfae: VDBG_00519
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Entry
VDBG_00519 CDS
T02227
Name
(RefSeq) nuclear polyadenylated RNA-binding protein
KO
K14411
RNA-binding protein Musashi
Organism
val
Verticillium alfalfae
Pathway
val03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VDBG_00519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_00519
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
VDBG_00519
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
TFIIA
Motif
Other DBs
NCBI-GeneID:
9529192
NCBI-ProteinID:
XP_003008837
UniProt:
C9S699
LinkDB
All DBs
AA seq
473 aa
AA seq
DB search
MAGIGKARSSTSLPLRRIQPALSDGDLDNGKLDGRNTLYQSHAARDTKMFIGGLNWETTD
QSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVKEHFLDGKIIDPKR
AIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFE
SEEGVDACLKTHLEIHGKPIEVKKAQPRGNLREEEEAARRGGGKFRKGGDDGGTNGQGGM
NNQMGGAGGMTPQGMAQHFQRMQQYFAMMQQQMAMQRGMPMNPAMMQQMMQMQQMQQMQN
QMMGGRGAGGPNVQNPQAMMNNMNPAMMQQMQQMQQQQQQQMMGGGGGGGGGSDGGQGSP
APEQQQAQGGGDGFNNNNNNNNNNFNNSSSKCSTSNSSRGRGAEARRRTEASAWAAAGRA
DVVGGHHQQQPVDPNHAPPANAPTGPKNAGRPGANYRGGGRGNNRGFHPYSRG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccggcattggtaaagcaagatcgtcgacctctttgccgctgcgacgtatacagccc
gcgctatcggatggtgacttagacaacggaaagctggacggcaggaatacgctgtaccaa
agccatgctgctcgcgacactaagatgttcattggtggactgaactgggagacgaccgac
cagtctctcagggattactttgcccaattcggcgaggttgtcgagtgtaccgtgatgcgc
gacagcaccaccggccggtcgcgaggctttggcttcctcacgttcaaggatgccaagact
gtcaatatcgttatggtcaaggagcatttcctcgacggcaagattattgatccgaagcgc
gccatcccccgcgacgaacaggagaagacgagcaagatcttcgtcggcggtgtcagtcaa
gagacgaccgatcaggagttcaaggattactttgctcagttcggccgcgttgtcgatgcc
accctcatgatggacaaggatacgggccggccaaggggcttcggctttgtcacgtttgag
agcgaggagggcgtcgatgcctgcctcaagacgcacctggagatccacggaaagccgatt
gaggtcaagaaggcccagccgcgcggcaacctccgcgaggaggaggaagctgctcgtcgc
ggtggtggcaagttccgcaagggcggagacgacggcggcaccaacggccagggcgggatg
aacaaccagatgggcggcgccggcggcatgacaccccagggcatggcgcagcactttcag
cgcatgcagcagtacttcgccatgatgcagcagcagatggccatgcagcgcggcatgccg
atgaacccggccatgatgcagcagatgatgcagatgcaacagatgcaacagatgcagaac
cagatgatgggtgggcgtggcgctggcggccccaatgtccagaaccctcaagccatgatg
aacaacatgaacccggccatgatgcagcagatgcagcagatgcaacagcaacagcagcag
cagatgatgggcggcggcggcggtggtggcggcggcagcgatggcggccagggcagcccg
gcgccggagcagcagcaggcccaaggcggcggcgacgggttcaataacaacaacaataac
aacaacaacaacttcaacaacagcagcagcaaatgttcaaccagcaacagcagcaggggc
cgaggggcggaggccagaaggcgtacggaggcttcggcatgggcggcggccgggagggcc
gacgtcgtgggagggcatcatcagcagcagcctgtcgatcccaaccacgcgccgccggcg
aatgcgccgactggtcccaagaacgctggcaggccgggcgccaactaccgcggcggtgga
cgaggcaacaaccgcggcttccatccgtactcgcgtggctag
DBGET
integrated database retrieval system
