Verticillium alfalfae: VDBG_00532
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Entry
VDBG_00532 CDS
T02227
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
val
Verticillium alfalfae
Pathway
val03022
Basal transcription factors
val03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDBG_00532
09124 Replication and repair
03420 Nucleotide excision repair
VDBG_00532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_00532
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_00532
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
VDBG_00532
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
VDBG_00532
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
9529205
NCBI-ProteinID:
XP_003008850
UniProt:
C9S6B2
LinkDB
All DBs
AA seq
71 aa
AA seq
DB search
MPRAIRGVLVECDPSIKSIIVNIDSSNHDFIIEDLDDQRVVVKENMVGELKRRLDDRLKE
TQQIVEDSGSE
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcgccatccgaggcgtcctcgtcgagtgcgatccctccatcaaatcaatcatt
gtcaacattgactcgtccaaccacgacttcatcattgaggacctcgacgaccagcgcgtc
gtcgtcaaggagaacatggtcggcgaactcaagaggcgcctcgacgaccgcctcaaggag
acgcagcagattgtcgaggactcgggctcggagtga
DBGET
integrated database retrieval system
