KEGG   Verticillium alfalfae: VDBG_00674
Entry
VDBG_00674        CDS       T02227                                 
Name
(RefSeq) WD repeat-containing protein pop3
  KO
K08266  target of rapamycin complex subunit LST8
Organism
val  Verticillium alfalfae
Pathway
val04136  Autophagy - other
val04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:val00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    VDBG_00674
   04136 Autophagy - other
    VDBG_00674
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:val04131]
    VDBG_00674
Membrane trafficking [BR:val04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    VDBG_00674
   mTORC2 complex
    VDBG_00674
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_EIPR1 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_DCAF12 PALB2_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_NUP159_NUP214 B-prop_COPA_B_2nd Frtz Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 9530564
NCBI-ProteinID: XP_003008992
UniProt: C9S6V5
LinkDB
AA seq 318 aa
MSVILCTAGYDHTIRFWEALSGICSRTIQHPDSQVNRLCISPDKRFLAAAGHHTVKLFDI
KSTNPNPLLTFEGHTGNITGVAFHCEGKWMVTSSEDGTVKIWETRSGQVQRSYSHGCPAN
DVVIHPNQGEIISCDRNGSVRVWDLAENNCSHQLIPEEDVSVSSVTVASDGSLLCAANNA
GNVFVWQLLQAYDRTQLVPVTHFSAHKEYITRILLSPDVKKLATCSADHTAKIWEVKDIE
PVPDEEGPKPYPLEATLNGHQRWVWDCAFSADSAYLVTSCSDHYARLWELHSQQIIRQYN
GHHRGSVCVALNDYSEAR
NT seq 957 nt   +upstreamnt  +downstreamnt
atgtctgtgattctttgcacagctggctacgaccacaccattaggttctgggaagcactc
tccggcatttgctctcgtacgatccagcaccccgactcgcaggtcaaccgtctctgcata
tctcccgacaagcgttttctcgctgctgccggccaccacacggtcaagctcttcgacatc
aagtcgaccaacccgaaccccctcctgacctttgagggccacaccgggaacatcacaggc
gtcgcctttcactgcgaaggaaaatggatggtcacaagctctgaggacggcaccgtcaag
atctgggagacacggtcaggccaggtccagcgtagctacagccacggctgccccgccaac
gacgtcgtcattcacccgaaccagggtgaaatcatcagctgcgaccgcaacggcagcgtt
cgcgtgtgggacctggccgaaaataactgctctcaccagctgatccccgaagaggacgtg
tccgtgtcgagcgtcaccgtcgctagcgacggctccctcctgtgcgcggccaacaatgca
ggcaacgtctttgtctggcagctcctccaggcctacgaccgcacccagctcgttcccgta
acccacttcagcgcccacaaggagtacatcacccgcatcctcctctcgccggacgtcaag
aagctcgccacgtgcagcgccgaccacacggccaagatttgggaggtcaaggacatcgag
cccgttcccgacgaggagggccccaagccctaccctctcgaggccactctcaacggccac
cagcgatgggtctgggactgcgccttcagcgccgactcagcgtacctagtcacgtcgtgc
tcagaccactacgcgcgactgtgggagctgcatagccaacagatcatcaggcagtataac
ggacatcatagaggatctgtttgtgtagcgcttaacgattactccgaggcaagatga

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