KEGG   Verticillium alfalfae: VDBG_00789
Entry
VDBG_00789        CDS       T02227                                 
Name
(RefSeq) karyopherin
  KO
K15436  transportin-3
Organism
val  Verticillium alfalfae
Pathway
val03013  Nucleocytoplasmic transport
val03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VDBG_00789
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    VDBG_00789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:val03016]
    VDBG_00789
Transfer RNA biogenesis [BR:val03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    VDBG_00789
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_2nd Xpo1 TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd Importin_rep_3 IBN_N Adaptin_N HEAT_SCC3-SA GAT RVT_N
Other DBs
NCBI-GeneID: 9530681
NCBI-ProteinID: XP_003009107
UniProt: C9S796
LinkDB
AA seq 933 aa
MAANGAQGSYTPENVLAAVVTMRGGEREAKKQAHEYLERFQKSKDAWPLVIGILQSDADA
EAKLFAATTMRGKLTYDLSTDISDSELPALREQILLLLKHYASGLRPIRVQLCVCLAVLA
IHMKDWKDVLPVVEEELSERTKELLGDNAERVVHLLVNYAQASAKPADDPLLMECITSWL
REVPVNTIVRSPLCDVIFNGISGDSPREAAETICTILRETRDVDDNQDTIQLLLSRILQL
QPRIEKAVAEEETETYEALTKILATAAESWVVAIVREPGHFRPIVDAVLECAARDRDREV
IEHTFDFWYELKQYLVLDIYIEARLQLVDVYGKLVDVLFNHLRYPEGNENDLFEGDREAE
ERFREFRHRMGDTLKDACAVMGVTDCLTKVLNGIKTWSAERSTTTSAPGVVPHWQELEAP
LFAMRAMGQMVPKDENIVLPQLMPLLVEVPNHEKLRFATIMILGRYTEWTAEHREYLEPQ
FTYIVSSFHTDSKEVVRAAAMAIKYFCTDCRELLSDQVLQLQTFYDQILDKLPDMSQEEI
TEGVASVVAVQPEAEMYKLLKLYCDPLVARLMNKANNATTEEGKVALADHVQLITIFVQI
VKPYSAPGAENQAVKYWQEVFPVLAKIVENFLDFVPICERICRCWRNMIISYRTAMTPLL
PELANKLASGFAASRQGAFLWVTAAIMREFSEEREHVDQAITQSIYSFFEAQATTFLRVL
NELRPSELPDVIEDFFRLLIDALLYFPHRLIPSELLLPIYEAAIYALTLEQRDPLSATLH
FLRDLLTYGGDNPATSDKLPADVAAKIQEIVKSLLGSHGEKLVKQVLAGMMITFPRDCFA
DGSGVLLSMFELLPAETTVWVERTLQLLPQGTVTPAEANKLMIKIKERIGGDQNNMRQVR
ALLQDFTNTYRRRYVAPRDGLGQLEADRFRFNR
NT seq 2802 nt   +upstreamnt  +downstreamnt
atggctgccaacggtgcgcagggatcgtacactcccgagaatgtgcttgcggcggtagtc
accatgcgcggtggggagcgagaggccaagaagcaggcacacgaatacctggagcgcttt
cagaaatcgaaagatgcttggccgctcgtcattggcatcctgcagtctgatgccgatgct
gaggcgaagctgttcgcagctacaacgatgcgcggaaagctcacatatgacctttccact
gatatttcggattcggagcttcctgcgcttagggagcagatcctcctactcctgaagcac
tatgcatccggtcttaggccgatcagagtccagctctgcgtttgcttggcagtcctagct
atacatatgaaagactggaaggatgtcctccccgtcgtcgaagaagagttgtctgagagg
acgaaagagctactgggcgacaatgcggaacgagtggtccacctacttgtcaactatgca
caagcatcagccaaaccagccgacgaccctctgctgatggagtgcatcacgtcgtggctg
cgcgaggtgcccgtgaataccatcgtgcgctcgccgctttgcgacgttattttcaatggt
atttctggcgactcacccagggaggctgcggagaccatttgcacgatccttcgagagaca
agagatgtcgacgataaccaagacaccatccagctcctactttcccggatccttcaattg
caacctaggattgagaaggctgtagccgaggaggagacagagacatacgaagccttgacg
aagatcctcgcgactgctgccgaatcatgggttgtggccattgtgcgcgagccaggccac
ttcaggcctatcgtcgacgctgttctcgaatgtgctgcccgcgacagagaccgtgaggtc
atcgagcatacattcgacttctggtatgagctcaagcagtaccttgttttggatatctac
attgaggcgaggcttcagctcgtggatgtctacggcaagcttgtggatgtcctcttcaat
cacctccgctacccagaagggaacgaaaacgacctgttcgagggtgatcgtgaggccgag
gaaagattccgcgaattcaggcaccgcatgggtgatacgcttaaggatgcctgcgccgtc
atgggagtgacggactgtctgaccaaggtcctgaatggcattaagacgtggtcagcggag
agaagcaccaccacctcggcccctggtgtagtaccgcactggcaggagctcgaggccccc
ttattcgccatgcgtgccatgggtcaaatggttccaaaggacgagaatattgtcctgcct
caactgatgcccctcctggtggaggtgcccaaccacgaaaagctccggttcgcgaccatc
atgatcctcggccgctataccgaatggacagccgagcaccgcgaataccttgagccgcaa
ttcacctatattgtctcgtccttccacactgattctaaggaggttgtcagggcggcggcc
atggcgatcaagtatttctgcactgactgcagagaacttctcagcgaccaagtcctccaa
ctccagactttttacgatcagattctcgacaagcttcccgacatgagccaggaagagatc
acagagggtgttgcgagcgtggtcgccgtccagcctgaggctgagatgtacaagcttctc
aagctgtactgtgatccgctcgtcgccagactgatgaacaaggccaacaatgccactacc
gaggaaggcaaggtggctttggcagaccacgtgcagctgatcaccatcttcgttcaaatc
gtcaagccgtactctgctcctggagccgagaaccaggcagtcaaatactggcaagaggtc
ttccctgtgctcgcaaagattgtcgagaacttcctcgactttgtgcccatttgtgagcgg
atctgccggtgctggcgcaacatgatcatctcgtacaggacggccatgacaccactgctg
ccggagctggcaaacaagctggccagcggattcgccgcctccaggcaaggcgcattcctt
tgggttaccgcggccatcatgcgcgagttctccgaggagcgcgaacacgtcgaccaggcc
atcactcagagcatttactccttcttcgaggcccaagccacgactttcttgcgcgtgctc
aacgagttgcggcctagtgagctccccgacgtcattgaggacttcttccgtctcctcatt
gatgcactgctctacttcccccacagactcatcccttcggagctgctgcttccaatttac
gaggccgccatctatgcccttacgctcgagcaacgcgacccgttgtcggctactctccac
ttcctgcgggatcttttgacatacggtggtgacaacccggccacctcggacaagctgcca
gcggacgttgcagcgaagatccaggaaatcgtgaagagcctgctcggcagccacggcgaa
aagctcgtcaagcaggtgctggctggcatgatgatcacgttcccccgcgactgtttcgcc
gacggtagcggtgtgttgctctccatgttcgagctcctccccgcagagacgactgtctgg
gtcgagcgaacgctgcaactgttgccacagggcaccgtgacgcctgccgaagcgaacaag
cttatgatcaagatcaaggagcgcatcggcggtgaccagaacaacatgcgccaggtcaga
gcccttctgcaagacttcaccaacacataccgccgacgatatgtcgcacctcgcgacggg
ctcggtcaacttgaggcagatcgtttccgcttcaaccgctag

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