Verticillium alfalfae: VDBG_00992
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Entry
VDBG_00992 CDS
T02227
Name
(RefSeq) DNA topoisomerase
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
val03032
]
VDBG_00992
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_00992
Enzymes [BR:
val01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VDBG_00992
DNA replication proteins [BR:
val03032
]
Eukaryotic type
DNA Topoisomerases
VDBG_00992
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
VDBG_00992
Centrosome formation proteins
Centriole proteins
VDBG_00992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
APAF1_C
Motif
Other DBs
NCBI-GeneID:
9530890
NCBI-ProteinID:
XP_003009309
UniProt:
C9S837
LinkDB
All DBs
AA seq
1688 aa
AA seq
DB search
MDFSDESMFSAQEESDAFSPEPKPKAAKAPAKKAPAAKKPAAKKLTQTTLKTAAAPKKRP
VSFSDDEASGLSNTPPSSKKLKKAPAASKSSGNPLAEIENDSMALDEPSAPAPAVKGTKK
TVEETYQKLTQLEHIVKRPDTYIGSVERTEMPMWVYNKETQLMEFRKVTTVPGLYKIFDE
ILVNAADIKVRREESGEEPVTHIKVNIDREAGQISIENNGKGIPVEMHKQHGIYTWTDNM
SKMGKAKITSSKSSDFVRITFKPDFKRFSMEGIDDDLEALLYRRVYDMAGTIKGIKVHLN
GTVVKPSAFKGYSEMYAKAIAKERASEEGGEPKVTVEMDKNDNPRWDVGFTVSDGSFQHI
SFVNNIATTSGGTHVNYVADQIVQYLTKYLDKKKKGHALKPQHIRNHIFVFINCRIENPS
FNSQTKEQMTTKISSFGSKCVLSEAFLKKVAASDAIQNIMSFAEKKADKMMAKSDGNRRS
RINNAKLVDANLAGTKRGHECTLILTEGDSAKSLAVAGRAILDPDRIGVFPLRGKMLNVR
DASIEQITKNQEIQNIKQFLGLKHKQNYTDTKGLRYGHLMIMADQDHDGSHIKGLLINFL
QVQYPSLLQIPDFFREFITPIVKVWQGKNPKNPQKLQAFFTQPQYEEWKEAHKNEISRWE
YKYYKGLGTSSNEDAQVYFTNLDDHLKEFDTMQSSEADLFDLAFSKKKADARKEWLGNFV
PGTYLDHSTKSITYDDFVNRELILFSMADNMRSIPSVLDGLKPGQRKVMFACFKRNLTKD
QKVVELAGYVSEKAAYHHGEMSLQQTIIGLAQNFVGSNNVNCLEPSGNFGSRLAGGSDAA
SPRYIHTRLSPFARKIFSVLDEPNLEVQMEDGKPIEPKVYAPIIPMVLCNGADGIGTGWS
TSIPNYHPMEIVRAIKRRMGRLDSDDTEGKPFETMMPWFRGWKGTPEPAEKDRYKFNGIY
ETDDKTGEIIIKELPIRMWTDDFKAKLEEVISGAKGPAWIKDYKEFNDHKNVNFVIQLDE
KHYKDIHKTHEGIMDRFKLNKQVATSNLVAFDSTGRIRKYEKVEDILEEFYVYRLDMYSA
RKKHWLGVYHSDYRKLKNQARFIQEIIDGELIVSKKRKPVLVQELRDRKYEAFPKNDGKK
QATTEEEDMDASDNEDDSVGGAADYDYLLSLPIWSLTLERLERLNSAIMKKKGEHDALLA
QSEKDLWCQDLDEFTEEWEAQLEMDDKIQSKINRMGRRRSRKIGAGGGKVSRNKADDDFE
PERKRAAPKAKAAAKPVPAAKRFQEQFDRKLEIAKAESPVDAFSDDDFAILAKPKAAPKT
APKAKEPVLKAEESDDDTATAALARKSSVPASRPKPKAKETLPKFADSSDFSDGDLTSMS
AKKKKPAASVEPEAEPVMGGRTKRAAAAKARPVFDLSESDASDNDFGDVGDIGQMVHGYK
STTTDPSKELKNGRLSLHGMNRPESSHGAREAALPKLKSKPSRHILDDDSHDETNYEALA
VRSSPHKPVASKDDDLEEFLSDDSVPARKPSKASSSSREPVPPPALEVKKARGRPAGTKN
KQKDDAATAKAPAAKAKAKAAPKTAPKAAPKAAAKPLPLSPAAKAYSASKEAKKPAKKTV
FSDDDDDSDDMMVDADDAEPSSPPPRPAARGRPGRAAAKKKPTYIIDDDEESSVAMDEPQ
DDGFSDSD
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atggatttctcggacgagtcaatgttcagcgcgcaggaggagtcggatgccttttctccc
gaacctaagcccaaggcagccaaggctccggcgaagaaggccccggcggccaagaagcct
gcagccaaaaagttgacccagacgaccctcaagacggccgcagcaccgaagaaacgccca
gtgtcattcagcgatgatgaagcctccgggctctccaacacccctcccagctcgaagaag
ttgaagaaggccccggctgccagcaagtcgagcggcaacccgcttgccgagattgaaaac
gacagcatggcgctcgatgagcccagcgcccccgcgcctgcggtcaagggcacaaagaag
acggtagaagaaacgtaccagaagctcacgcaactcgagcacatcgtcaagcgtcccgat
acctacatcggctccgttgagcgtaccgaaatgcccatgtgggtctacaacaaggaaacc
cagttgatggaattccggaaggtcaccacggttcccggcctttacaaaatctttgacgaa
attctcgtcaacgctgcggatatcaaagtccgtcgcgaggaaagcggcgaagaacctgtc
acacacatcaaggtgaacattgaccgcgaagccggtcaaatcagcatcgaaaacaacggc
aagggtattcctgtcgagatgcataagcaacatggtatctatacctggaccgacaacatg
agtaagatgggaaaggccaagattacctcgagcaagtccagcgactttgtgcgcatcacc
ttcaagcccgacttcaaacggttcagcatggagggcatcgacgatgacctcgaggccttg
ttgtaccgccgagtctacgacatggctggcacgatcaagggcatcaaagtccacctcaac
ggcaccgtggtcaagccgtcggcgttcaagggctacagcgagatgtacgccaaggctatc
gccaaagaacgagcctctgaggagggaggtgagcccaaggtcaccgtggaaatggacaag
aatgacaacccccgatgggatgttggattcaccgtgtcggacggctctttccagcacatt
tcattcgtgaacaacattgccactacgtccggtggcacacatgtcaactacgtcgctgac
cagattgtccaatatctcacgaagtacctcgacaagaagaagaagggccacgccctgaag
ccgcaacatattcgcaaccacattttcgtcttcatcaactgccgcatcgaaaacccctcg
ttcaactctcagaccaaggagcaaatgactaccaagatcagcagctttggtagcaagtgt
gtcttgtcagaagcgttcctaaagaaagttgccgcctccgatgccattcagaacatcatg
agctttgccgagaagaaggcggacaagatgatggccaagagcgatggcaacaggcgatcg
cgcatcaacaatgccaaactcgtcgacgcgaatttggcgggcaccaagcgcggacatgag
tgcaccttgatcttgacggagggtgactctgccaagagtctggctgttgcgggtcgcgct
attctcgaccctgaccgcatcggtgtgtttccccttcgtggtaagatgttgaacgtccgc
gatgcatccattgaacagatcacgaagaaccaagaaatccagaacatcaagcaattcttg
ggactgaaacacaagcaaaactacacagatacgaagggtctgcgttatggtcatctcatg
atcatggccgatcaggaccacgacggcagtcatatcaagggccttctcatcaacttccta
caggtccaatacccttccctcctccagatccccgactttttccgggagttcattacgccg
attgtcaaagtctggcaaggcaagaaccccaagaacccccagaagctccaggcgttcttc
actcagcctcaatatgaggagtggaaagaggcgcacaagaatgagatcagccgctgggag
tacaagtactacaagggtctgggcaccagttccaacgaagatgcccaggtctactttacc
aatctcgacgatcatctcaaggagtttgacacaatgcagtcctccgaggcggatctgttc
gatctcgccttctccaagaagaaggcagatgctcgtaaggagtggcttggcaactttgtt
ccgggaacgtatctcgatcactcgaccaagtcgatcacgtacgatgatttcgtcaataga
gagttgatcctcttcagcatggctgacaatatgcgttccatcccgtcagttcttgacggt
ctgaaacctggtcagcgaaaggttatgttcgcttgcttcaagaggaacctcaccaaggac
cagaaggtcgtggaattggccggttatgtttccgagaaggccgcgtaccaccacggtgaa
atgtctcttcaacagacgatcattggcctcgctcagaactttgtcggttcaaacaatgtc
aactgcctcgagcccagtggtaacttcggttctcgtcttgccggtggatcagacgctgcc
agcccccgttatatccacacgcgcttgtctccattcgcccggaagatcttttctgttctt
gacgagcccaacttggaagttcaaatggaggacggaaagccgatcgaacccaaggtctat
gccccgattattcccatggttctgtgcaacggcgccgatggcattggtacaggttggagc
acttcgattcccaattatcacccaatggagattgtcagggccatcaaaagacgcatgggt
cgccttgattctgacgacaccgaaggcaaaccctttgagacgatgatgccctggttccgt
ggttggaagggtaccccggaacccgccgagaaggaccgttacaagttcaacggcatttac
gaaaccgacgacaagacaggtgaaattatcatcaaggagctccccatccgaatgtggacc
gatgatttcaaggcgaagttggaagaagtgatcagcggcgccaagggcccggcctggatt
aaggactacaaggagttcaacgatcataaaaatgtcaattttgtcattcagcttgatgaa
aaacactacaaggacatccacaagacccacgaaggtatcatggacaggttcaagttgaac
aagcaggttgcgacgtcgaacctggtggcatttgacagcaccggccgcattcgcaagtac
gagaaggtcgaggatattctggaagagttctacgtctaccgccttgatatgtacagcgca
cgcaagaagcactggcttggggtctaccactcagactaccgtaagctgaagaaccaggcg
cgcttcatccaggagatcatcgacggtgagttgatcgtctccaagaagcggaagccagtt
ctcgtgcaagaactgcgcgaccgcaagtacgaagcgttccccaagaacgacggcaagaag
caggcgacgacggaagaagaggacatggatgcgtccgacaatgaggatgacagcgttggc
ggcgctgccgactacgattatctactttcgctgcctatctggtccttgacactcgagcgc
ttggaaaggctgaactctgcgatcatgaagaagaagggcgagcacgacgctcttctggcc
cagagcgaaaaagacctttggtgccaagatcttgatgagtttaccgaagagtgggaggca
cagcttgagatggatgacaagatccagtccaagattaaccgtatgggccgccgacgatcg
aggaagatcggtgctggcggaggcaaggtcagccgcaacaaggctgacgatgacttcgag
cctgagaggaagagggcagctccgaaagcgaaggcggccgcgaaaccggtacctgctgcc
aagaggttccaggaacagtttgaccggaaactcgaaatcgcaaaggccgagtcgccagtc
gacgccttctctgacgatgactttgcgatccttgccaagcccaaggctgcgccaaagact
gcacccaaggcgaaggagcccgtactcaaggccgaggagtcagacgatgacaccgctacg
gccgctcttgcacgcaagagcagcgtgccggcctcgaggccaaagccgaaggcaaaggag
actctgcccaaattcgccgactccagcgacttctctgacggcgacctgaccagcatgagt
gcgaagaaaaagaaacccgctgcgtctgtcgagcctgaagccgagccggtcatgggtggg
cgcacgaagcgagcagcggctgccaaggcccgacctgtcttcgacctgtcagagtcggat
gctagcgacaacgactttggcgatgtcggtgacattggccaaatggttcacgggtacaag
tcgacgacaacagatccttccaaggagctgaagaatggtagactcagcttgcacggcatg
aaccgccccgagtccagccatggcgcacgtgaggcagcccttccaaagctcaagtcgaag
ccttcaaggcacattctggacgatgacagccacgacgagacgaactatgaggctctcgcg
gtgcggtcgtcgccccacaagcctgtggccagcaaggacgatgatctggaggagttcctc
agtgatgactcggtgcccgctcgtaagccttccaaggcatcctcgtcgtcgcgggaaccc
gtgcctccaccggctcttgaggttaagaaggcccgtggacgccccgcgggaacgaagaac
aagcagaaggatgacgctgcgacagcaaaggctcctgccgccaaggccaaggccaaggca
gctcccaaaacagctcccaaagcagcccccaaagccgccgcgaagcccctgcctctctca
cctgctgccaaggcatactcggccagcaaggaagcgaagaagcccgcgaagaagaccgtc
ttcagcgacgacgacgacgatagcgacgatatgatggttgacgctgatgacgccgagcct
tcttcgccgcccccacgtcccgcggctagaggccgtccgggtcgtgcggctgccaagaag
aagcccacctacatcatcgacgacgatgaagagagctccgtggccatggacgagccgcag
gatgatggctttagcgatagcgactaa
DBGET
integrated database retrieval system
