Verticillium alfalfae: VDBG_01087
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Entry
VDBG_01087 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
val
Verticillium alfalfae
Pathway
val04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
val00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
VDBG_01087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_01087
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
VDBG_01087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
PDS5
HEAT
Cohesin_HEAT
Cnd1
Adaptin_N
MMS19_C
PhoD_N
Cnd3
Motif
Other DBs
NCBI-GeneID:
9530987
NCBI-ProteinID:
XP_003009404
UniProt:
C9S905
LinkDB
All DBs
AA seq
1866 aa
AA seq
DB search
MADNTSGQGPAPPGPVNGTYGQPQPSFHEHSVRPFTLQEALPYSPQTSVVPFTADLIPDP
TVGSGLPASSIAHLFSNKDFDQLNRQASQDPNSKQLKHAVDHLLQELRPNQRTFYKFKQI
TKPLTDLESSKHRPEGLTKGLTPLSTMVLERAPTFIRRPGDGPTRTTPNGESGVHDQQRP
PKKSGSPQDAKRAISNAEAHRQNAARIEIAIPAKQFDPTAYVAYSDQPSPIDQSTAPTAP
QQALPQGVVKLEPTGTSEVSSAQSTAAPVKRESETRNAAFAVELPHTTFNKAEYAHVPDE
MDEPLQLSVRREAYHDSQDALGASLDQRQRAETALLDLDRLARSVFDAVGHALQRDPGYA
HIVTITNNGDPALASDAHQRLQKAVEKVISLGSYAEVPLDVLMRIQKLSEVSVKQTLELD
LKLDDSWGESDVNRWLDQLQQVEIGLRAGRTMMRIMCGGREEKLLYSEDAIKQGIELYKN
VIDGIVVPVVELKGSGPTSDLFKLLQPHKKELATILVNCQRLFALLTNLVRSIQLSDVAL
GTLEFSASSLIFVDNAHYEKDSVVGVQKFDGIRLVAMDMLCQIFLVKPDERNGIFNELLT
SLEKLPVGKQSARQFRLSEGGNIQPLSALLMRLVQSSSGKIQNKEQRVRTSEDADGEEDE
LQNGTATHAGPDQQIFTIKSEIQGADEHHTAMTELENVSKPLVDGVQRNASHVVNFIVNR
ALKSTKSGDAPFRNLLDLFVEDFTTCMDSPDWPAAELILRQLTYSMIRLWENDKSVAPAK
NMALELLGVMCAAVSRLRSHIRKVAESKDSSTGDQLGRFLADLAMAALEQNNRVEHLVSW
SGPFRATLEHLEERCADDPHLRGAISYLITDWAERCSLAYHGVEEDMEERDREYGRLAYR
LRMMIDDPRWLSSEYTFKKVAPNHAKLSYSIVLLRSPFCELFPRMLNALLNAMASDQASV
RSKSLRSINQLLETDPAILDGNSLVVELILNCSNDSSPQVRDSAIGLMGKCIQLRSNLEE
KMMEKILDRFVDSGVGVRKRAMKLARDIYLRNQSKQARSAIASNLLHRVQDPDESVRDLA
RQMIEEVWFAPFYHAEDTPAFKSSLTEHVALMIQTSKSGNITAILDKVLQSILGTTNKAQ
KGPFEVSIKLVASMFELIDNLDSDDPSIPHGRDALQVLQVFAKADPKLFTFEEIRLLKPH
LSSYSTVDDRAVFKAVAVIYRQVLPQLTIKHEEFLKDVRTQLQYCLGKIIKPLLDDSVAC
LWILAQLLGNRMNLARLAGSSLAGTVKLRQSPPNEKTVQLFIRYSQIIGAVGKHCNLDSD
WDSFKAAGSPSLPDSKDKSVTKLMVDQLSPWADSKKPLEARKAALEAIGLICQSHPRNYV
SPNVIPRFEAVFSEKNPVLEDAVLRSFKEFLISEERRSEASTAKPATGPDDKKRNLTVMG
GTTHDDVSSATTQRFLEDITRIALSSKDEHAFLAVEVLGSINRQGLTHPKEVGVTLITLE
TCPVHRISEVAYMEHRALHEKYETVVEREYVKAIQVAYEYQRDIIKDPRGATENPFQSKL
HLLMEVLKISKSKNRQKFMTKLVAHVDFDPNKLETTDEMPPQMGISRFIIENLAFFEYMT
VGEVQLTVAAMEKVVSSTGSNLAHVIETELFNVRMDMDTEQPLQPVAPKEGQVEDDSVVQ
EQSFGPPLAKLNVTPERLRQLGAGAIILLALWEARTHIRRLYGMNSNRRESKSKAAAKDL
SKTPVKVPGITGDKFWEEVTSHISGLASQECLMRKCRAFVELMNVDKEFKVQKEDEELDE
EEPATPSGGEDEVGTLNRKRKAGPGTPGSRKKQARMNGQKPRGRPRKGAQPTSDDEDADG
DFDDLF
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacacaagcggccaagggcctgcaccgcccgggccggtgaacgggacctat
ggacaacctcaaccatcctttcacgagcattccgtgcggccgttcacgctgcaagaggca
ctgccctattcgcctcaaacatcggtcgtgccatttactgcagacctgattcctgatccc
acggttgggtccggcctacctgcctcgagcatcgctcatctctttagcaacaaggatttc
gaccaactcaacagacaagcttcgcaggatccgaacagcaaacaattgaaacatgctgta
gaccacttgcttcaggagctgagaccaaaccagcgaacattttacaagttcaagcaaatc
acgaagccgctcaccgacctcgagtcatcaaaacacagacccgaaggcctcacaaaaggt
ctgacgccactgagcaccatggtccttgaaagggcgcccaccttcattcgacgaccaggc
gatggcccgactcgaactacgccaaatggcgaatctggcgttcacgaccaacagcgaccg
ccgaagaagtcaggctcgccacaggacgcgaaacgggccatttccaacgcagaggcgcat
cgccagaatgcagctcgcatagagattgccattcccgccaaacagttcgacccgactgcc
tacgttgcttattctgaccagccttcgcccatcgatcaaagcacagcacccacggctcct
cagcaagcccttccccaaggagttgtcaagcttgaacccactggcacgagtgaagtttcc
tccgctcagtctaccgctgcgccagtcaaaagagagtcagagactaggaacgccgctttc
gctgttgagcttccacatactacgttcaacaaggcagagtacgctcacgtaccagatgag
atggatgagcccctgcaactgtcggtcagacgagaagcctaccacgatagccaggacgcg
ctcggggcaagtctagaccagcgacaaagggctgagacggcactgctcgacctggatcga
ctagctcgcagtgtgttcgacgctgttggtcatgctttgcagcgcgatcctggctacgct
cacatcgtgaccatcactaataacggtgatccggcacttgcgagcgacgctcatcaacga
ttgcagaaagccgtcgagaaggtcatcagtctgggaagctatgctgaagtccccctggat
gtgctcatgcggatccagaagctcagcgaagtgagtgtcaagcagacccttgagttggat
cttaaacttgatgacagttggggcgagtccgatgtcaatagatggctagaccagcttcag
caggtggagatcggcttgagggcgggccggaccatgatgcgtatcatgtgcggcgggcgt
gaagaaaagctgctgtattcggaggatgccattaagcagggcattgagctgtacaagaat
gtcatagatggcattgtggttccggtggtcgagctcaagggcagcgggccgaccagcgac
cttttcaaacttctccaaccacacaagaaggaactcgccacaatcctggtcaattgccaa
cgcctattcgcgcttctcacgaatctcgtccgaagcattcagctctccgatgttgctctc
ggcactctcgaattctctgcctcgagcctgattttcgtcgacaatgctcactacgagaag
gattccgtggtgggggtccagaaattcgacgggatccgtttggtggcgatggacatgctc
tgccagatcttccttgtcaagccagatgagcgtaatggcatcttcaacgagcttctcacg
tctcttgagaagttgccagtcggcaagcaaagcgctaggcagttcaggttgtcagaaggc
gggaacatccagcctctctctgcactcctgatgcgtctcgttcagtcgagctctggaaag
atacaaaacaaagagcaacgtgtaaggacatcagaagacgccgacggtgaagaggacgag
ctccaaaatggcaccgcgacacatgcggggcccgatcagcagatcttcacgattaaatcg
gagatccagggtgcggatgaacaccatactgccatgactgaattggagaatgtctcgaaa
cctcttgtcgacggcgtgcagcggaacgcctctcacgttgtcaacttcattgtcaaccgg
gctctgaagtcaaccaagtctggggacgcaccgttccgcaacctactggatcttttcgtc
gaagacttcaccacatgcatggattcgcctgactggccggctgccgaattgattctccga
caattgacctactctatgattcgcttgtgggagaacgacaaatcagtggctcctgcaaag
aacatggctctcgaactgctcggtgtcatgtgtgcagcggtgtcgaggctgcgctcccat
atcaggaaagttgcggagagcaaagactcgagcactggtgatcagttggggcggtttctc
gcagaccttgccatggccgccctggagcagaacaatcgcgtggagcacttggtttcctgg
tcgggacccttccgggctacccttgagcacctcgaggaacgctgcgccgatgaccctcac
ctcaggggtgccatctcatatctgatcacggattgggccgagcgttgcagcttggcttac
cacggcgtcgaggaagatatggaggagcgtgatcgcgagtatggccgtctcgcctatcga
ctccggatgatgatcgatgaccctcgctggctctccagtgagtatacgttcaaaaaagtt
gcgcccaaccacgccaagctgtcttactcgattgtattgcttcgctctcctttctgcgag
ctattccctcgtatgcttaacgctctacttaacgccatggctagcgatcaggcatccgtc
cgaagcaagagtctgagaagcatcaatcagcttttggagaccgacccggcaattctcgac
ggcaactcgttggtcgtggagctcatcctgaactgttctaatgattcttcgccacaagtc
cgcgactcggctattggcctcatgggcaagtgtattcagctacgcagcaatctcgaggag
aagatgatggaaaaaattctggatcgcttcgtcgacagcggtgtgggagtacgcaagcgc
gccatgaaactcgcgcgtgacatctacctgcgtaatcagagcaaacaggcccgtagcgct
atcgccagcaacctactgcaccgtgtgcaagaccccgacgagagtgtgcgcgatctggct
cggcagatgatcgaggaggtttggttcgcgcctttctatcatgccgaggacacacccgca
ttcaagtcctcgctgaccgaacacgtcgctctcatgatccagacgagcaagtctgggaac
attaccgctatcctagacaaggtgctgcaatcaatcctcggcacgacgaacaaggctcag
aaagggccatttgaggtgagcatcaaactggtcgccagcatgttcgagctcatcgacaac
cttgattcggacgacccatctattcctcacgggcgagacgcattacaagttcttcaagtc
tttgcgaaagccgatcccaagctcttcacctttgaggagatccgcctcctgaaaccacac
ctgtcgagctatagcaccgttgacgaccgggccgtgttcaaagctgttgccgtcatttac
cgccaggtgttaccgcagcttacgatcaaacatgaagagtttctcaaagatgttcgaaca
caacttcaatactgtctcggcaagattatcaagccactcctggatgattcagtcgcttgt
ctctggatcttagcccagttgcttggcaatcgtatgaacttggctcgtcttgccggatcc
agtcttgcggggacagtcaagcttcgtcagtcgcctcctaacgagaaaactgtccagctc
ttcatccgctactcccagatcattggcgccgtcggcaagcactgcaatctagactctgat
tgggattcattcaaggccgcaggcagcccgtctctgcccgattccaaagacaagtcggtt
acgaagctcatggtggatcaactctctccttgggctgactcaaagaagcctctggaggca
aggaaggccgctttggaggcgattgggctcatctgccaatcgcaccctcgcaattacgtg
tcccccaacgtgatcccgagattcgaggctgtcttttcggagaagaaccccgtcctcgag
gatgctgttttgaggtccttcaaagagttcctcatcagtgaggagcgacgatccgaggcc
tctaccgccaaacccgccacgggcccagatgacaagaagcgcaatttgacagtgatgggc
ggaaccacccacgacgatgtcagcagcgcaactacgcagcgcttcctggaagacattacg
agaatcgctctatcgtctaaggacgagcacgccttcttggccgtcgaggttctcggtagc
atcaatcgacaaggcctcacgcatccaaaggaggttggtgtcacgctgatcactctggaa
acctgcccggttcataggatctctgaggttgcttacatggaacatcgagctctgcacgag
aagtacgagaccgttgtcgaacgtgagtacgtcaaggccatccaagtggcttatgaatat
cagcgcgacattataaaggatccccgcggcgcaacggagaaccctttccaatcaaaactt
catctgttgatggaggttctaaagatcagcaagtcgaaaaatcgtcagaagttcatgacc
aaactcgtcgctcacgttgatttcgacccgaataaactggaaaccacggacgaaatgcca
cctcagatgggcatctcccggttcatcattgagaaccttgcctttttcgagtacatgacc
gtcggagaggtgcagttgactgtcgccgccatggaaaaggtcgtctcttcgacagggtct
aatctcgcgcatgttattgagacggagctgttcaatgtccgcatggacatggatactgaa
cagcccctgcaacctgtcgcgccgaaagagggacaagttgaggacgattcagtcgtgcaa
gaacaatcgtttgggccgccccttgcgaagctcaatgtcacccctgagcggctgcggcag
ctcggagccggcgccatcattttactagcgctctgggaggcgcgaacacacatcaggcgt
ctctacggcatgaacagtaaccgcagggagtcgaagagcaaagcggctgccaaggatctc
agcaaaacacccgtcaaggttccgggcatcacgggtgacaagttttgggaagaagtcact
tctcatatcagcggtctggcttcacaagagtgcctcatgcgcaagtgccgagcctttgta
gagctcatgaacgttgacaaggagttcaaggttcagaaagaggacgaggagcttgatgag
gaagagcccgcgactcccagcggtggcgaagacgaagtgggaactctcaaccggaagagg
aaagcaggtccaggcacgcccgggagccgcaagaagcaggcgaggatgaacggccaaaag
ccgcgcggacgaccacgaaagggagcccagccgaccagcgatgatgaggatgctgacgga
gactttgatgacttgttctga
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integrated database retrieval system