Verticillium alfalfae: VDBG_01209
Help
Entry
VDBG_01209 CDS
T02227
Name
(RefSeq) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VDBG_01209
Enzymes [BR:
val01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
VDBG_01209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM-like
fn3_3
CarboxypepD_reg
NOMO_3rd
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
9534110
NCBI-ProteinID:
XP_003009526
UniProt:
C9S5W1
LinkDB
All DBs
AA seq
529 aa
AA seq
DB search
MYTSKLSLWALAGSLAAVAGKGPFLESLNDGTWVIGNDFWNVTQGPVYATKLFWQGVPGA
DLVGSAVGHYTGYGQSTDGESNLRYTNATIAARGTHFIDVSFTAPAGDLHWVIFDDLSGA
YQYFVNRALPNISILRTLWRLAPEYFTHGRTHLKDEPLPISILYAKSTMFQDETCSLQPV
IIHQYDWSTPSRDRDSYGVYGSRDTSHFRVGQKTTQPVGKVWGPWLWYLNNGSIPDVQKK
RAKELKHFPYKWLDDAAYHQRGGIEGTLLLSDGRPASKAAVFLGDSDTSIRPSIQGTNYY
YTTYTNDKGRFSFDDVRTGSYGLIAYSNGNRLADVYTNFTKSGITVTKDKTLILGRLKWN
VADRAKRIFQVGEFDKKALGFKNGGLPYQHGVTEDSPANLTFIVGKSKTSDWYYASSAIG
KWTIEFEVSAADIATNKTAILSVSLAGCSQSGALNVDVNGQDYGTLSKDNLTSDPALYRS
GKTSGEWRFIQYRVEPGVLVEGVNKVGFSVTRYTKWRGFLWDSIILEWE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtacacctcgaagctttccctgtgggcgctggccggatcccttgccgccgttgcaggc
aagggtccattcctggagtccttgaacgacggcacttgggttattggtaacgatttctgg
aatgttacacaaggtccggtctacgcgacaaagctcttctggcagggtgtccctggcgca
gatcttgtcggttccgccgtaggccactacactggttatgggcagtcgacagacggggaa
tccaacctccgttacaccaacgcgacgattgctgcacgtggtacacacttcatcgacgtc
agcttcactgcgcccgctggagatcttcactgggtcatctttgacgacctctccggcgcg
taccagtattttgtcaaccgtgccctgccgaacatcagcattttgcgaacactctggcgg
ctggcgccggagtacttcacccatggccgcactcatctcaaggatgagcccttgccgatt
tcgatcctgtatgcaaagtcgaccatgttccaggatgagacttgcagcttgcagccggtc
atcatccaccagtacgactggtccacgccgtcaagagaccgcgactcttatggtgtctac
ggatctcgtgatacgtcgcatttccgtgtcggtcaaaagacaactcagcccgtgggtaag
gtctggggtccctggctttggtacctgaacaacggaagcatcccagatgtccagaagaag
cgtgccaaggagctgaagcacttcccctacaaatggcttgacgatgccgcctaccaccag
aggggcggcatcgagggtactctgctactgtccgacggccgccccgcatcgaaggctgcc
gtcttcctcggtgacagtgacacgtcaatccgtccctcgatccaagggaccaactactac
tacacgacttacaccaacgataagggacgcttctcctttgatgacgtacgcactggctcc
tatggccttattgcgtactcgaatggtaacagactggccgacgtgtacaccaactttaca
aagtctggcattaccgtaactaaggacaagaccctcatcctcggtcgcctgaaatggaac
gtggcggatcgcgcgaagcgaatcttccaagtcggcgaatttgataagaaggcccttggc
ttcaaaaacgggggcctgccttaccagcacggcgtcactgaggacagtcctgccaacctt
acattcatcgttggcaagtcaaagacttcggactggtactatgcttcatcggccattgga
aagtggaccatcgagtttgaagtctcggctgcggatatcgcgaccaacaagacagcgata
ctgagtgtgtctctggctggttgctctcagagcggagcgctcaacgtcgatgtgaatggc
caggactacggtaccttgagcaaggacaacctcactagcgatccggcgctttaccgttct
ggaaagacatctggagagtggcggttcattcagtacagagttgaaccgggtgttctggtc
gaaggtgtgaacaaggtgggcttcagtgtgacgcgttacactaagtggaggggattcctt
tgggacagcatcattcttgaatgggagtag
DBGET
integrated database retrieval system
