Verticillium alfalfae: VDBG_01256
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Entry
VDBG_01256 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_01256
04121 Ubiquitin system [BR:
val04121
]
VDBG_01256
Enzymes [BR:
val01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
VDBG_01256
Membrane trafficking [BR:
val04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
VDBG_01256
Ubiquitin system [BR:
val04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
VDBG_01256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-RING_Vps41
Prok-RING_4
zf-RING_16
Zn_ribbon_IFT122_C
zf-P11
Baculo_RING
Motif
Other DBs
NCBI-GeneID:
9534159
NCBI-ProteinID:
XP_003009573
UniProt:
C9S6G0
LinkDB
All DBs
AA seq
693 aa
AA seq
DB search
MVEASGAPPEKQVPSVQDLTPTSLAQPAPLDGSATSYCTRVQRERPRAPTVAGTIGDCSS
NTPSVFLQHPAAHATYEAYPSSADRFVQRLDDSPIRHTASSFGLLTTKARKSISPGALRP
SHTFTELAQASPLFQRQTSSQFVFTNSLPRRQISARSNLHGPPVYEVRPFPTHTLDTPSS
FISLAFRALRTAGLLAGLGLTALAAYQRNQEEANMNFQDGSRARGDREAGLNREVVYCHA
CEHEWEKDTLHGLISQENDPRDFHDAPSPLSSGDGPRGPRRADSDSDPDEADIEEHLHQG
PHGFNVHRSTWGHPHGDEQGGRQPPDPANGDQVIGRFLELLSTFGNGAQGGPDSDHDHPQ
RHPQPFGSSPFGGSGNVRTFTTRRGNGFTSFTIATGPIHVQGGGRARAFGRPSEEQGQGQ
GNDDFQSVFSNILTGAGPPQQPHGEDMPGQGSRPRAAGTQNLAASLHQILNMLAPGNGQF
GDAVYTQEALDRIISNMMETNPQSNAAPPASEDAIGKLQRKAVDDDMLGPEGTAECTICI
DELKKGEEVVYLPCKHWFHDTCVVMWLKEHNTCPICRTPIEERTESASDGQQGDGGEGSG
RPAPGPSNSAPPGGGQPPPFFGFGMPSPHATNTGSRTRQRSPTPSSWNREHQQAGAGQGQ
NQTPSQGGPLSWLRNRLSRSGPSDGPPPDGESR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaagctagcggtgccccaccagagaagcaggtgcccagcgtccaggacctgacc
ccaacgtcacttgctcaacctgctccactcgacggctctgccacatcatattgcaccagg
gtacaacgcgagcgcccacgagctcctacggtcgccggtaccatcggcgattgttcatcg
aacacaccctccgtcttcctacaacatcctgcggcgcatgccacctacgaggcctatccc
tcatctgccgaccgtttcgttcaacgattggatgattcaccaatccggcacacagcctcg
tcatttggcttgctgacgaccaaagcccgcaaatcgattagtccaggcgccctccgacct
agtcataccttcaccgagctagcacaagccagtcctctgtttcagcgtcagacttccagc
caattcgtcttcacgaactctttaccccgccgccaaatatctgctcgatccaaccttcac
ggtccccctgtgtatgaagtcagaccctttccgacacatacgctcgatacgccttcgagc
ttcatcagtctggcgttccgagcgcttcgaactgctggccttcttgccggccttggtctg
acagctctcgctgcctaccagcgcaatcaagaagaggccaacatgaacttccaagatggg
agtagggctcggggcgatagagaagccggcctgaatcgcgaagtcgtctactgccatgcg
tgcgaacacgaatgggaaaaggatacgcttcatggactcatttcccaagagaacgatcct
cgcgacttccacgatgccccatcgcctctctcctccggcgacggtccccgtgggccccgc
agggcagactccgactccgaccccgacgaagctgatattgaggaacacttacaccaaggc
ccccatggattcaatgtacatcgatccacatggggtcatcctcacggagatgaacaaggt
gggcgccagccgcctgatcccgccaatggggaccaggtgataggccgcttcctcgagctc
ctgagcacatttggaaacggggcacaaggcgggccagactctgaccatgaccatccgcaa
aggcatccccaaccatttggcagcagtccgtttggcggttctggaaatgtgcggacgttt
actactaggcgaggcaacggtttcacaagcttcacaatcgctaccggaccgatccatgtc
caaggcggtggtcgggctcgagcttttggacgtccttccgaagagcaggggcaggggcag
ggcaatgatgattttcagtcagttttcagcaacattctcacgggcgccggtccaccacaa
cagccgcacggtgaagacatgcctggacaaggctcacggccccgcgccgctggtacccag
aaccttgctgcgagtctgcatcagatcttgaacatgctggcaccaggaaatggtcaattt
ggtgatgcggtctacacacaagaagctctcgaccggatcatttccaacatgatggagacg
aacccgcagtcaaacgccgcgccgccagcctctgaggacgccatcggcaaattgcaacgc
aaggcagtggatgacgacatgctgggccccgaaggcacggccgagtgtaccatttgcatc
gatgagctgaagaagggcgaggaagtggtatacttaccttgcaagcactggttccacgac
acgtgcgttgtgatgtggctcaaggagcacaacacttgtcccatttgtcgaacaccgatc
gaggagaggaccgaaagtgcgagcgatggtcagcaaggtgatggaggggaagggagcggc
agaccggcacccggaccatcgaattcagcgccacccggtggtggacaacctcccccgttt
ttcggattcggcatgccaagtccccacgcaacgaacacgggctctcgcactaggcaacga
agcccaacaccgagcagttggaatcgggaacaccagcaggcaggggcaggccaaggacag
aaccagactccatcacagggtggcccgcttagttggctgaggaatcgcttgtccaggtct
ggtccgagtgacgggccgcccccggatggtgaatctcggtaa
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