Verticillium alfalfae: VDBG_01258
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Entry
VDBG_01258 CDS
T02227
Name
(RefSeq) transcriptional activator xlnR
KO
K21451
xylanolytic transcriptional activator XlnR
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
val03000
]
VDBG_01258
Transcription factors [BR:
val03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
ZIP only
VDBG_01258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fungal_trans
Zn_clus
Fungal_trans_2
DUF4306
Motif
Other DBs
NCBI-GeneID:
9534161
NCBI-ProteinID:
XP_003009575
UniProt:
C9S6G2
LinkDB
All DBs
AA seq
952 aa
AA seq
DB search
MLSNPLHRFSPYHAALPASTLFSNGHAPANHPHPGGMNEMSQGYALQQQLQHAAVHNPHL
ARNAPQQKHRQHPYGPATRTSTGSGPIRRRISRACDQCNQLRTKCDGQHPCAHCIEFGLG
CEYVRERKKRGKASRKDLAQAAAAAAQAANGSNGRSDTDENGESSEHNGEPAPRRVSTNG
SSSHSGIKVDDMSEDATRQSQRTASLDTLDDLNAHQHNMAQHQVLEREHLGSPTTLDMNS
YGAGMHHGYERQALGAPMLNGPTHGPYGPSQGNMPAYTELPYGMQGQSPAAYPTNPHFRI
GNSPMGAYPMGNEPTSPGWINMSSPTAQYPSHIPQHSYVHGTQNLRYPVLEPLIPHLNNI
VPIPLACDLIDLYFASSSSAQMHPMSPYVLGYVFRKRSFLHPTKPRLCQPALLASMLWVA
AQTSDAPFLTSIPSARGKICQRLLELTVSLLKPLIHTPTGEPSPATSPVIDGVALGGLGV
ALPGTMSLDALTGESGAFGAAGKLDDVITYIHLATVVSASEYKGASLRWWNAAWSLAREL
KLGRELPPSMRPMGPVDGDDGDVGASNGMNGGTSTPGSITEEEREERRRIWWLAYIVDRH
LALCYNRPLFLLDLECSGLFQPMDDMAYQNGDFESYMGNTTDPNLAGEGLHQQPLRIRGP
HFECTGHSIFGYFLPLMTILGEIVDLHHARNHPRFGVGFRMARDWDEQALEITRHLEAYE
HSLKRFEQQYLRRMHPEGEGLAPNCDQASALDAPDHNGAADIGTPSVHSVHTNSSNRMTE
SDIQTKIVMAYGTHVMHVLHILLAGKWDPINLIDDNDLWISSQGFITATGHAVSAAEAIS
HILEFDPGLEFMPFFFGIYLLQGSFLLLLIADKLQLEASPSVVKACETIVRAHEACVVTL
NTEYQRNFSKVMRSALAQVRGRVPEDLGEQHQRRRELLALYRWTGDGTGLAL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgttgtccaacccgttgcatcgattttcgccctatcacgccgcgcttccagcttcaaca
cttttctccaacgggcatgcgcccgccaaccacccccatcctggcggcatgaacgaaatg
tcccagggttacgcccttcagcaacaacttcaacatgctgcagtccacaacccccacctc
gcgcgaaacgctcctcagcaaaaacaccggcaacacccatacggtccagcaaccaggact
tctaccggttcaggccctatcaggaggaggatcagtcgggcatgcgaccagtgcaaccaa
ttgaggaccaagtgcgacgggcaacatccttgcgctcattgtatagaattcggcctgggc
tgcgaatacgtccgtgagaggaagaagcgcggcaaggcgtccaggaaagacctcgcccaa
gcagcagcagcggcagcacaggcggccaacggatccaatggaagatcagatacagacgag
aatggagagtcctctgaacacaatggcgaacctgcccctagaagggtttcaactaatggt
tcgagttcccactctggcattaaggtggatgatatgagcgaagacgcaacgcggcagagc
cagcgaacggcatccctggacactttggacgatttgaacgcacatcaacacaacatggcc
cagcaccaagtcttagagagggaacatcttggcagcccaactactctggacatgaatagc
tacggagccggcatgcaccatggatatgaaaggcaagcgttgggagccccgatgctaaac
ggtccgacacatggaccgtatgggcccagccagggcaacatgccggcatatacggagcta
ccgtacggcatgcagggtcagagtccggcagcctaccctacgaatcctcatttccgaatc
ggcaatagcccgatgggcgcatatcccatgggcaacgagccaacttctcccgggtggata
aacatgtcctcaccaacggcacaatatccatcccatatccctcaacacagttacgtacac
ggcactcaaaacctacgttacccagtattggagcctctcatccctcacctcaacaacatt
gttcccataccattggcctgcgacttgattgacctctacttcgcctcatcatcatctgcg
cagatgcaccccatgtcgccctacgtcctaggttatgtcttccggaagcgatctttcctc
catccaacgaaaccaagactgtgccagcccgctctgctagcaagcatgctttgggttgcc
gcccaaactagcgatgctccatttttgacgagcatcccctcggcgaggggcaagatttgt
cagaggctccttgaattgactgtcagtcttctcaagccactgatccatacgcccacggga
gagccctcgccagcaacaagtccagtcattgatggcgttgcacttggagggcttggggtt
gcgcttcccggcaccatgagcctcgatgctctgacaggagagtcaggcgcgttcggggct
gctggcaagctggatgatgtcatcacctacatccacttggctactgtggtgtctgcaagc
gaatataagggagcgagcctacggtggtggaacgcagcgtggtctctagcacgcgagctc
aagcttggtcgcgagctcccgccttccatgagacccatggggcctgtcgacggagatgac
ggggatgtcggagcttccaacggcatgaatggcggtaccagcacgccgggctccatcact
gaagaggaacgagaagagcgccgacggatctggtggctggcctatattgtcgatcgacat
ctggctctttgttacaaccgccctctcttcctcttggaccttgaatgctccggccttttc
cagccgatggacgacatggcctatcagaacggtgatttcgagagctacatgggtaacacg
acggatcccaacctcgccggcgagggccttcatcagcaacctttgcgaatccgcggacct
cactttgagtgtacaggacatagtatctttggatatttcctccctctcatgaccatactt
ggtgagatagtcgacttgcatcacgcgcgaaaccacccgcgctttggtgtaggttttcgc
atggcacgagactgggatgagcaggctctggagatcacgcgccacctcgaggcttacgag
catagtttgaagcgtttcgagcagcagtaccttcgtcgcatgcaccccgaaggcgaaggt
ctagcgcccaattgcgatcaggcgtctgcactggatgcccctgaccacaacggcgctgca
gatattggtactccctcggtccactcagtgcacacgaactcgtcaaatcgaatgacagag
tcggatatccagaccaagatcgtcatggcatatggcacgcatgtcatgcatgtactgcat
attcttctcgccggaaagtgggatcctatcaatttaattgatgataacgatctatggatt
tcaagccagggcttcatcacggccacagggcacgccgtctcggcagccgaagccatcagc
cacattctcgagttcgacccaggcctagagttcatgcctttctttttcggcatctacttg
ctgcagggctcgttcttgctgctcctaattgcagacaagctgcaattagaagccagccca
agtgtagtgaaagcttgcgaaaccatcgtccgggcccacgaagcttgcgtggtgacactt
aatacggagtatcagcgcaacttcagcaaggtaatgcggagtgctctggcacaggtccgt
ggtcgggtgcccgaagacctaggcgaacagcaccagcgccgacgtgagctgctggctttg
taccgctggactggcgacggcactggtcttgccctgtga
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