Verticillium alfalfae: VDBG_01420
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Entry
VDBG_01420 CDS
T02227
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_01420
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
val04147
]
VDBG_01420
Membrane trafficking [BR:
val04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
VDBG_01420
Exosome [BR:
val04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
VDBG_01420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Cnd1
HEAT_2
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
9536432
NCBI-ProteinID:
XP_003009737
UniProt:
C9S861
LinkDB
All DBs
AA seq
841 aa
AA seq
DB search
MASFLDHAYSLVHQDNTADVPTLADLKTQLEKGTDESKVETMKRILTIMLNGDSMPQLLM
HIIRFVMPSKHKALKKMLYFYYEICPKLDSTGKLKQEMILVCNGIRNDLQHPNEYIRGNT
LRFLCKLREPELIEPLLSSARQCLEHRHAYVRKNAVFAVASIFQHSPSLIPDAPELISTF
LEAETDPTCKRNAFAALSSIDHERALVYLSQVFDGIPNAEELLQLVELEFIRKDAVQNSQ
NKPRYLRLIFDLLEANTSTVVYEAASSLTALTNNPVAVKAAAAKFIELSIKEADNNVKLI
VLDRVDQLRRKSPGVLDDSVMEILRVLSSPDIDVRRKALNLVLDMVSSKNVEEVVLLLKK
ELSKTVDQEYEKNTEYRQLLIHSIHQCAIKFSEVAASVVELLMDFVADFNNASAVDVINF
VKEVVEKFPKLRKPIVARLVATLGEVRAGKVYRGIMWIIGEYSLDEGDVRDAWKRIRASL
GEIPILASEQRLLDDNDDEKKEEEQVNGHSKPAAPSGSRKVLADGTYATETALTSQSSAA
AKLEAVKAAQKPPLRQLILDGDYYLATVLSATLTKLVMRHAQISKDTARTNALRGEAMLI
MISIIRVGQSQFVKAPIDEDSVDRIMSGVRSLSEFTQHKQIETVYLDDTRKAFRAMVQAE
EKKRAAKEAVEKAKTAIQVDDVVQIRQLSKKNAGSGVDEIDIDLERATGGESAAEDVSSK
LSRVVQLTGFSDPVYAETYVTVHQFDIVLDVLLVNQTSETLQNLSVEFATLGDLKVVERP
TTQNLGPHGFHNVQCTIKVRRRARRRSSAPCGPSLSGEQGQHQLRRRRCATSSSSSWQRP
T
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttctcgatcatgcctacagcttggtccaccaggacaacacggccgacgtg
ccgaccctggccgatctcaagacgcagctggaaaaggggaccgacgaaagcaaggtcgag
acgatgaagcgcatcctcaccattatgctcaacggcgactcgatgccccagctcctgatg
cacattatccgattcgtcatgccctcgaagcacaaggccctgaagaagatgctctacttt
tactacgagatctgccccaagcttgactccactggcaagctcaagcaggagatgatcctg
gtttgcaacggcatcaggaacgatcttcaacatcccaacgaatacattcgcggcaacacc
ctgcgcttcctctgcaagctccgcgagcccgagctcatcgagcccctcctgtcctccgca
aggcaatgtctggagcaccgccacgcctacgttcgcaagaatgccgtctttgccgttgcc
tccatcttccagcactctccttcgctcatccctgacgcgcccgaactcatcagcaccttc
ctcgaggccgagaccgaccccacatgcaagaggaatgcgtttgccgccctgtcctctatc
gaccacgagagggctctcgtttacctcagccaggtctttgacggcatcccgaacgcagag
gagctccttcagctggtggagctcgagtttatccgcaaggatgctgtgcagaactcccag
aacaagccgcggtatctgcgtctcatctttgacctgctcgaggccaacacgtctactgtc
gtatacgaggccgcctcgtccctgaccgccctcacgaacaaccctgttgccgtcaaggcc
gccgccgccaagttcattgagctcagcatcaaggaggccgacaacaatgtgaagctgatc
gttctcgatcgcgtcgatcagctgcgcaggaagagccccggcgttctcgacgactcggtc
atggaaatcctgcgtgtgctgtccagccccgatatcgacgtcaggaggaaagcgctcaac
ctggttctcgacatggtgtcgagcaagaacgtcgaggaagttgtcttgttgctgaagaag
gagctgtccaagacggtcgaccaggagtatgagaagaacacggaataccgccagctcctg
atccactccatccaccagtgcgccatcaagttctccgaggtggcggccagcgtcgttgag
ctgctgatggactttgtcgccgactttaacaacgcgtctgcagtcgatgtcatcaacttt
gtcaaggaggtcgtggaaaagttccccaagcttcgcaagcccatcgttgccaggctcgtc
gccacgctgggcgaggttcgcgctggcaaggtctaccggggcatcatgtggatcattggt
gaatactccctcgacgagggtgacgttcgggatgcttggaagaggatacgcgcgagtctc
ggcgagatccccatccttgcctcggaacaacgactgctggatgataatgacgacgagaag
aaggaggaggagcaggtcaacggacattcgaagcccgcggcgccctctggctcgcgcaag
gtgttggcagatggaacctacgcgaccgagactgccctcacaagccagtcgtcggcggca
gcgaagctcgaggccgtcaaggcggctcagaagccaccgctgagacagctcatcctcgat
ggcgactactatctcgccactgttctatcagccaccctgaccaagctcgtcatgaggcac
gcacagatctccaaggataccgcccgcaccaacgccctgaggggcgaggccatgctcatc
atgatctccatcattcgcgtgggccagtctcagtttgtcaaggcccccattgacgaggac
tctgtcgaccgtatcatgtccggtgtgcggtcactgtccgagttcacccagcacaagcag
attgagacggtgtatctggacgacacgcgaaaggccttccgcgccatggtgcaagcggaa
gagaagaagcgcgcggcaaaggaggccgtcgagaaggccaagacggccatccaggtcgat
gatgtggtccagatccggcaattgtcgaagaagaacgcgggcagcggcgtggacgagatt
gacattgacctcgagcgggccacgggcggcgagtcggccgctgaggatgtgtcgtccaag
ctcagcagggtagtccagctcaccggtttctccgatcccgtatacgccgagacgtatgtc
acggtgcatcagtttgatattgttctcgacgtcctgctcgtcaaccagacgtcggagacg
ctgcagaacctgtcggtcgagtttgcgacgctgggcgacctcaaggtggtcgagaggcca
acgacgcagaacctgggcccgcacggcttccacaacgtgcaatgcacgatcaaggtccgg
cgtcgtgcacggagacgcagttccgcaccatgtggaccgagtttgagtggagaacaaggt
caacatcaactcaggcgaagacgctgcgcgacttcctcgagcagctcatggcagcgacca
acatga
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