Verticillium alfalfae: VDBG_01455
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Entry
VDBG_01455 CDS
T02227
Name
(RefSeq) transcription factor tfiiib complex subunit brf1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_01455
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
VDBG_01455
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
zf-AD
PhageP22-tail
Motif
Other DBs
NCBI-GeneID:
9536467
NCBI-ProteinID:
XP_003009772
UniProt:
C9S8F6
LinkDB
All DBs
AA seq
681 aa
AA seq
DB search
MPPPPLQRTNARRPWCPRAGPKCPNKHCTNPKVVDGICHGCGRIAEESNIVAEVQFGETS
SGAAMVQGSYISADQGGARTFGPGGRGAGSSQRDKTIIDAKNLIHGYVWRLAGNPRPHIV
DKAVATFKLAMGQGFTQGRTLQMVCAACIYYAFRSQERVEGNERETQFVMMLDLADLTRL
NVFRLGRCFKALVNKVPIGSLACTIFPEDIIHRLATKLDFGPQTDKVAEDAVRLITSMRR
DWIIMGRRPSGICGACLLMAARMNNFRRTMREVVYIVKVTSHTIQERMKEIGRARDPLRM
IRLPSTDHSDEYKKKIEEKRRKRKRTTGDDGSDRDGSVLESPAPPPIRTGPDLSSVPCPS
ASYLRDKDGYLIPPVPPPEPTSAEDRVLNGQLDGEDESNFPALVDAFGDDKSKARGVAGN
AKGRPPKHPLPINEEWVDDEENMEEQISEIMNDPETMQHAAAYASAEQRARLHADWALQY
EPSKTVSMAPEVLEDEFADDVEVMNALLSPEEVKLKEIVWVNENQDWLRKNQQREFDRKL
EAGKPKRPRKRNKPRLGEAQTSPASTPIEAAQNVMKHHGMSKRLNYDAISSLLNSGPGGG
PGTATGTASGQTSQANSVLGDAFRDREIEPEEEEDDDDDEEAIGEGEGGGEGEEYGEEYD
EDYNEYEENYDDEYDQPENDE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgccgctgcagcgaacaaacgcgcgtcggccatggtgtcctcgagcgggc
cccaagtgtcccaacaagcactgcacgaaccccaaagtcgtcgacggcatctgccacggg
tgtggtcgcatcgctgaggagagcaacattgtggccgaggtccagttcggcgagacgtcc
tccggtgctgccatggtgcagggtagctacatctcggccgaccagggcggtgcgcggacg
tttggccccggaggtcgcggtgccggctcgagccagcgcgacaagaccatcattgacgcc
aagaacctcatccacggctacgtctggcgtctcgctggcaatccccgcccgcacattgtc
gacaaggccgtcgccacgtttaagctcgccatgggccagggctttacccagggccgtacc
cttcagatggtctgcgccgcctgcatctactacgcctttcggtcgcaggagagggtcgag
ggcaacgagcgcgagacgcagtttgtcatgatgctcgatctcgccgacctgacgcggctc
aacgtctttcgtctcggccgctgcttcaaggcgctcgtcaacaaggtgcccattggcagt
ctcgcctgcaccattttccccgaagacatcattcaccggctggcgaccaagctcgacttt
ggaccgcagaccgacaaggtcgccgaggatgccgttcgcctcatcacatcgatgcgcagg
gactggatcatcatgggtcgtcgaccgtcaggtatctgcggtgcctgcctattgatggcc
gcgcgcatgaacaacttccgccgtaccatgcgcgaggtcgtctacattgtcaaggtcacg
agccatacgattcaggagcgcatgaaggagattgggagagcgcgggacccccttcgcatg
atccgccttccttctaccgaccactcggacgagtacaagaagaagatcgaggagaagcga
cgcaagcgcaagcgcaccaccggcgacgacggttcagaccgcgacggcagcgtactcgag
tctccagcgccaccgccgatccgaacggggcccgacctgtcatcggtgccgtgcccgagc
gcctcctacctccgcgacaaggacggctatctcatcccgcccgtgccgccgcccgagccg
acgtcggctgaagacagggtcctcaacgggcagctcgacggcgaggacgagagcaacttt
ccggcgctcgtggatgcgtttggcgacgacaagagcaaggcccgcggtgtcgccggcaac
gccaaaggccggccgccaaaacacccgctgccgatcaacgaggagtgggtggacgacgag
gagaatatggaggagcagatctcggaaatcatgaacgaccccgagacgatgcagcatgcc
gcagcctacgccagcgccgagcagcgcgcacgtctccacgccgactgggcgctgcagtac
gagcccagcaagaccgtctcgatggcgcccgaggtcctcgaggacgagtttgccgacgac
gtcgaggtcatgaacgcgctgctgtcgcccgaggaggtcaagctcaaggagattgtgtgg
gtcaacgagaaccaggactggctgcgcaagaaccagcagcgcgagtttgacaggaagctc
gaggccggcaagcccaagcggccccgcaagcgcaacaagccgcgtctcggcgaggcccag
acgtcgcccgccagcaccccgatcgaggctgcccagaacgtcatgaagcaccacggcatg
tcgaagcgtctcaactacgatgccatttcgagtctcctcaacagcggcccaggcggcggg
cccggcacggccacaggcacggccagcgggcaaacaagccaggccaacagcgtgcttggt
gatgcgttccgcgaccgggagattgagccagaggaggaggaggacgacgacgacgacgaa
gaggctatcggcgagggcgaaggaggtggcgagggcgaagagtacggcgaagaatacgac
gaggactacaacgagtacgaggagaactacgacgacgaatacgaccagccggagaatgac
gagtaa
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