Verticillium alfalfae: VDBG_01480 Help Entry VDBG_01480        CDS       T02227                                  Name (RefSeq) 5'-3' exoribonuclease   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism val  Verticillium alfalfae Pathway val03008   Ribosome biogenesis in eukaryotes val03018   RNA degradation Brite KEGG Orthology (KO) [BR:val00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     VDBG_01480   09123 Folding, sorting and degradation    03018 RNA degradation     VDBG_01480  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:val03021]     VDBG_01480    03019 Messenger RNA biogenesis [BR:val03019]     VDBG_01480    03009 Ribosome biogenesis [BR:val03009]     VDBG_01480    03016 Transfer RNA biogenesis [BR:val03016]     VDBG_01480 Transcription machinery [BR:val03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      VDBG_01480 Messenger RNA biogenesis [BR:val03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      VDBG_01480 Ribosome biogenesis [BR:val03009]  Eukaryotic type   Pre-60S particles    RNases     VDBG_01480 Transfer RNA biogenesis [BR:val03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     VDBG_01480 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N zf-CCHC_2 Motif Other DBs NCBI-GeneID:  9533391 NCBI-ProteinID:  XP_003007292 UniProt:  C9SA94 LinkDB All DBs AA seq 894 aa AA seqDB search MGIPAAFRWLSNKYPKIISPVVEDQPLQMEDGTTIPVETTGPNPNGEEQDNLYLDMNGIV HPCSHPEDRPAPKDEEEMMLEVFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF RSAQEAQEKEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTPFMDTLATSL RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNTRHVIYGLDA DLIMLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDKDGEYDEQDK AVALKPFIWLHVSIFREYLAIELDVPDLPFRFDLERAIDDWVFMCCFVGNDFLPHLPALE IRENGIDALTTIWKENLPHMGGYVTKDGHIDLKRVQLIMDGLAKQEDAIFKRRKEQEDRR EANAKRRKLQDERSGRGGRADASGRGRGKPPMDNASSGLALFPVSGFPNADPSAVTHDMV VGRSSNANINANAANKSAANVIRDRIQASGAQGKSANGDATTHPKVEVPAVAEEGAAAAS SVVKRKADVLDGPSQLTPNTGPSAAEEAAIDHVRMWEEGYADRYYEQKFHVDRNDIAFRH KVAQAYVEGLCWVLLYYYQGCPSWDWYYPYHYAPFAADFADLDKIEISFEKGRISKPFEQ LMSVMPAASRRALPEVFHDLMLNEDSEVIDFYPQEFEIDLNGKKFAWQAPHKSMLLRGLK MPTTALGRSDIEQLRNKSSRSGRGGWGGAPSGRYNDGGRGRGRGGGYGGRGAFHYAESGG RAQQHSSHYQNGSASRDHYGAQKAPHPPSAWQPPPPGHPGFGMGLPPPPPPTHFNNGRPS TYGLSHGSHEASPPYQNSYPGREDYGSRGRGSYQARGAGRSQNYHGDRQQPYRR NT seq 2685 nt NT seq  +upstreamnt  +downstreamnt atgggcattccagctgcgttcagatggctatcgaacaagtacccgaaaatcatctcgcct gtagtggaggatcagccgctacaaatggaagacgggacgaccattccggtagagaccacc ggtcccaatccaaatggagaagaacaggacaatctctaccttgacatgaacggtatcgtt cacccttgctcgcatccagaggatcgccctgcccccaaggatgaggaggagatgatgctc gaggttttcaagtacaccgatcgagtagtgaacatggtcaggccacggaaactactcatg atcgctgttgacggtgttgcgccacgagcaaagatgaaccaacagcgatcgcgccgattt cgctctgcacaagaagcccaagagaaagaggttgacaagcaggagcttctcaagcttctc aaacaacaaaatggtggcattttgccacctgagacccttgaaagcatgaacaagaaggct tttgattcaaactcgatcacacctggcacacccttcatggatacacttgcaaccagtctg cgttattggtgcgcatacaagcttaatactgatcctgcttgggctcgactcaaaatcatc atctccgacgctacagttccaggcgaaggagagcacaagatcatgaactacgtccgctct caaagaggctcgccagactacgaccccaatacccggcatgtcatctatggcctggacgcc gacctgatcatgctgggtcttgctacccatgagccacatttccgcgtactgcgagaggat gttttcgcacaagatgccaaggccaagatgtgcaaaatatgcggtcaaaaaggacacgat gcgcgcgtttgcaaaggcgaggccaaagacaaagacggcgaatatgacgagcaagacaag gctgtagccttgaagcctttcatatggcttcacgtatccatatttcgagagtacctcgct attgagcttgatgtacctgacttgccgtttcgattcgatctcgagcgcgcaatagatgac tgggtattcatgtgctgcttcgtgggcaatgactttttaccacatctgccggccctagag atccgagagaatggtatagacgcattaacgaccatctggaaagaaaatctgcctcatatg ggtggctacgttaccaaggacggccacatcgatctgaagagggtacagctcatcatggac ggcttggcgaagcaggaggacgccattttcaagcggagaaaagagcaggaagatcgccga gaagccaacgccaagcggagaaagctgcaggacgagcggagtggcagaggaggccgtgcc gacgccagcgggcgcgggcgcggcaaaccacctatggacaacgcatcctccgggctggcc ttgtttcctgtctctggcttccccaatgctgaccccagcgctgtgacacatgacatggtt gttgggcgctcgtcgaacgccaacatcaacgcgaatgccgccaacaaaagcgccgccaat gtcatcagggatcgaatccaagcatcgggagcccagggcaaatcggcaaatggtgacgca acaacccatccaaaagtcgaagtacctgctgtagccgaagaaggtgcagccgcagcaagc tctgttgtgaaacgcaaggcggatgttctggacggcccatcgcaattaacacccaatacc ggaccgtccgccgcggaagaggctgcgatagatcacgttcgaatgtgggaagaaggttac gcagaccgctactatgagcaaaagttccacgtcgatcgtaatgacatcgcctttcgtcat aaggtcgcacaagcctatgttgaggggctttgctgggtgcttctctattactatcaaggc tgcccgtcttgggattggtactatccctaccactatgcgccattcgcggctgattttgcc gacttggacaagatcgagattagcttcgagaaggggcgaatctcgaagccttttgaacaa ctcatgagtgttatgccagctgcatctcgccgtgcacttccagaggtctttcatgatctc atgctcaacgaggacagcgaagtcatagacttctacccccaagagttcgagattgacctc aatggcaaaaagtttgcttggcaagcccctcacaagtccatgctcttacgcgggctgaag atgcctaccacagctcttggtcggtctgacatagagcagctgaggaacaagtcctctcgc tcgggtcgaggcggttggggcggcgccccttcaggacggtataatgacggtgggcgcggc cgaggccgcggaggcggctacggtggtcgtggtgcctttcactacgcagaatctggaggc agggcccaacaacactcctcacattaccagaacggttccgcctcccgcgaccactatggc gcccagaaggcaccacatccgccttcagcgtggcaaccacctccaccaggtcaccctggc tttggcatgggtcttcctcccccaccccccccaacacacttcaacaatggccgcccgagt acctatggactgtctcatggaagtcacgaagcatctccgccataccagaactcgtatccc ggccgagaagactatggatcaagaggtcgtggaagctaccaggcaagaggagctggacgt agtcagaattaccatggcgataggcaacagccctatcggagatga

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