Verticillium alfalfae: VDBG_01484
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Entry
VDBG_01484 CDS
T02227
Name
(RefSeq) regulator of V-ATPase in vacuolar membrane protein
KO
K24155
rabconnectin-3a
Organism
val
Verticillium alfalfae
Pathway
val04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
val00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
VDBG_01484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_01484
Membrane trafficking [BR:
val04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
VDBG_01484
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
VDBG_01484
RAVE complex
VDBG_01484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40_WDHD1_1st
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
9533378
NCBI-ProteinID:
XP_003007296
UniProt:
C9SA98
LinkDB
All DBs
AA seq
1325 aa
AA seq
DB search
MRGILPGRPRSGLQALATGFWGSRQYTVYITGNAFAILDGPEQLVQTVYDDDEAALLAVA
FDEFSGKIATCTGSAVRVYKPLGHAEGALKWGLQSSFLIQTSETDPCLSWGASEELLVAA
STLRLYLTTSAAPSCFWEKALPNDAKSAQLSFDSAYIAVIGSHDTIVKVWRRLTYGADEV
CFDLACLPHPDVVTNIRWRKPYHTEQTIDNILYTTCIDFVLRIWTGYDSHSNQQLHLWAQ
VDLAWSVEGQALRSASKLSSAPVLFILDGREVAAAAEKAVQGHPSGEQLPEAAVQRLIGV
ANRNPELCFVLGDGDTMSALALENVGSRSQKLKVTSVAHINSQDFTPRQDFPSITHDLHV
EVQAYCARDTGRLRILVHEFNGRIRIFETDLVDLIDPDLACHQFDNRCTWSGHSSPIEKI
VRNYSGRSVVSRTADGESVVWTHSGGRATSGLSRQSVVPEAGHIHRICVLRKGRFVVFLK
HETISVWDCRRQKAIAMCHQPYELSGKPLCLLKLPRHHRDDYRTVHIATITSEQKGIVWQ
LDLPPYMAPDAASQEGSREATLMEFCRFELRNIEGLAYVLPVDPAGSSPITTGFLDVFAK
DVAISYTQSGRVDFWTARIDDADKRVEWLSTCCSETGLANPALVSGSTLKKAALVDSSRS
QLSIWDIGGARLEFSQDYEAHHTIRDLDWTSTPDSQSILAVGFQHRVVLLSQMRFDYLNK
GPAWAPIREISIRELTPHPIGDSAWLGDGHLVVGAGNQMLIYGRSFGLADSKVSTLRLPQ
KKDGVWDLFEAVQRLNGPLPIFHPQFLSQCILAGKTTLVHQILLALHQTFKYHIPGEHID
DYLGMKLDMFYMDTVLSGKVAKQQSDSYLKRGASDDPMQETFTEDVAAAINERLTKVGLP
QLSGQEQMQLADIIDCVGLVDKHRRSLDEDGARFMLFLRQHALRKGRISEVNISWREIVW
AFHSGSQDILVDFVIRQYHGSLLWESARESGIFMWLTDTNAMRTQFEIIARNEYTKSEMK
NPIDCSLYYLALKKKTVLQGLWRMASWNKEQGATQRLLANNFEDPKWRTTALKNAYALLS
KRRFEYAAAFFLLADHLTDAVNVCLHQLKDLQLAIAIARVYEGDNGPVLRKLLEDEVLNV
AAREGNRWLASWAFWMLGRKDMAVRSLITPVYTLLETPVVPDLRSKLFLTDDPALVVLYS
QLRQKTLQTLRGASKVTPRIEWEFVLHSAKLFDRMGCDLLGLDLVRNWEFPQPAATTGSL
LGGEANPLKLLRRRSSLVVDDMPFSSLRNEVRMAESGKGQSGRHQPPPTMFEEPDSSSLL
DSFGF
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtatcctaccagggagacccaggtccgggctccaagctttggcgacaggcttc
tgggggtcaagacaatatactgtatacatcacgggcaacgcctttgccatcctcgacggc
cctgaacaacttgtccaaacagtctacgacgacgacgaagcagctcttcttgctgtagca
tttgacgaattttcggggaaaatagcaacatgcacggggtcagccgttcgagtctacaag
cctttgggacacgcagagggcgcactcaagtggggactgcagtcgtcgttcctaatccaa
acaagcgaaacagatccttgtctatcatggggagcttcagaagagctccttgtcgccgca
tcgacccttcgtctataccttacaacctcagcagccccgtcgtgtttctgggagaaggca
ctaccaaatgacgcaaagtctgcacagctttctttcgactccgcctacatcgccgtcatt
ggatctcacgatacaatcgttaaggtttggcgaaggcttacctatggtgcagatgaggtc
tgtttcgaccttgcgtgtctacctcatcccgacgtggtgacgaatatccggtggcgcaaa
ccatatcatacagaacaaacaatcgacaacattctgtacaccacatgtattgatttcgtt
cttcgaatctggacagggtacgattctcactcgaaccagcaactccatctgtgggcacag
gtggaccttgcctggtctgtagagggtcaagccttaaggtcagcgtccaagctctcctcg
gccccggtgctgtttatccttgatgggagagaagttgccgctgctgccgaaaaggcggtt
caggggcacccgtcgggtgagcaactgccagaggcggccgtgcagcgtctgatcggggtg
gcgaataggaacccagaactttgctttgttctcggcgatggtgataccatgtccgccttg
gctttagagaatgttggctccagatcacagaagctcaaagtaaccagcgtcgcgcacatc
aactcacaggactttaccccacggcaggactttccttctataacgcacgatcttcatgtt
gaagtccaggcatactgcgctcgcgacacgggtcgtctccgaatcttagtccatgagttt
aatggcaggattcgcattttcgagactgacctggtggatttaatcgaccctgatcttgct
tgtcatcaatttgataatcgatgtacttggtccggccattcgtcaccgatcgagaaaata
gttcgcaattacagcgggcgatcagtcgtatcaaggacagctgatggagagagcgttgtc
tggacacattctgggggcagagcgacctctggactatcccggcaaagcgtcgtaccggag
gcgggtcatatacaccgcatatgtgtccttcggaaaggtcgatttgttgtgttcctgaag
catgagacaatttccgtatgggactgtcgccgtcaaaaggcgattgcaatgtgccaccag
ccgtatgagctctctggaaagcctctgtgcctcctgaaattaccaagacaccatcgagac
gactatagaaccgtccatattgccacaatcacttcagagcagaagggcattgtgtggcaa
ctcgacttgccaccatacatggcgccagatgcagcgtctcaggagggctcgcgtgaagcg
actctcatggagttctgcagatttgagctgcgaaatattgaggggcttgcttacgtattg
cctgttgatcccgcagggtcttccccgattacgactggtttcttggatgtgtttgccaag
gacgttgccatttcctacactcagtcaggtcgtgttgacttttggacagcacgtattgac
gacgctgacaagcgcgtagagtggctgtcaacctgttgttcggagactggtcttgcaaac
ccagcgctcgtgagcggtagcacgctcaaaaaggcagcccttgttgattcttcgcgatcg
caattatccatctgggatattggtggtgcccgccttgaattttcccaagactacgaggcc
caccacacgatcagagatctcgactggacctcaaccccagattcgcagtctattctggct
gttggcttccaacaccgggttgtcttgttatcgcaaatgcgttttgactacctcaataaa
ggccctgcctgggctccgatcagagaaattagcatacgcgagctaactcctcatccaatc
ggtgactctgcttggcttggggacggccatctcgttgtcggtgcgggtaatcagatgctg
atttatgggagaagctttggtctcgccgattccaaggtcagtaccttgaggctgccgcag
aaaaaagatggtgtctgggacctgtttgaggctgtacaaagactcaacgggccattgccg
atatttcatccccagtttctgagccaatgtatattggcgggaaagactaccttggtacac
cagatccttctcgcgctacaccaaacattcaagtatcacattccaggcgagcatattgac
gactatctcggcatgaaacttgatatgttttacatggacacggttttgtcgggaaaagtg
gccaagcagcaatccgattcctatttaaaacgcggtgcctcggatgatccaatgcaagaa
accttcacggaggatgttgctgcggctattaatgagcgactgaccaaggtcggtctccca
cagttgtcaggacaagagcaaatgcaactagccgacatcattgattgtgtaggcttggtc
gacaaacaccgtcgctcattagacgaggatggcgctaggttcatgctcttccttcgccaa
cacgccttgcgcaaagggcgtattagcgaggtcaatatttcttggcgggagatcgtgtgg
gcatttcattctggcagccaggacattctggtggattttgtgatacgacagtatcatggg
tcgcttctttgggaaagtgccagggaaagtggcatattcatgtggctgactgacactaat
gctatgaggacccagttcgagatcatcgctcggaatgagtataccaagagcgagatgaaa
aacccaattgactgcagtctctactatttagctttgaagaagaaaactgtgcttcaaggg
ctttggcgcatggcaagctggaacaaggagcaaggcgctacacaacgcctgctggccaat
aacttcgaagacccgaaatggcgaacgacagcacttaagaatgcatacgcattgttgagc
aagcgcagatttgaatatgcagcggcattctttctattggcggaccatctaacagacgct
gtcaatgtttgtctgcaccagctcaaggacttgcaacttgctattgccatcgcccgagtg
tacgagggtgacaacggtccagtccttcggaaactcctcgaggacgaagtcctcaatgtc
gcagctcgcgaggggaatcgctggcttgcctcgtgggcgttttggatgctcggtcgcaaa
gatatggccgtcaggtcgctgattacgcccgtatacactcttctagagaccccagtcgta
cccgacttgaggtctaagttgttcctgaccgatgacccagccttggtagtgctctactcg
cagcttcgacagaagaccttgcagacccttcgaggagcatccaaagtaacccctcggatt
gaatgggagtttgttcttcacagtgccaagctgtttgatcggatgggctgcgatcttctt
ggtctggatcttgtccgtaattgggagttccctcagccggcagcaacgacaggatccttg
cttggaggcgaggccaacccgctgaaacttctgaggaggcgaagttctctcgtggtggat
gacatgcctttttcaagcttgcgcaacgaggtacgaatggccgaatctggaaagggacag
tcgggaagacatcaacctccacccacaatgtttgaagaaccagactcgagctcgctgctg
gacagcttcgggttctag
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