Verticillium alfalfae: VDBG_01491
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Entry
VDBG_01491 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_01491
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
VDBG_01491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEN1_C
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
9533385
NCBI-ProteinID:
XP_003007303
UniProt:
C9SAA5
LinkDB
All DBs
AA seq
833 aa
AA seq
DB search
MGIKGIYRELGPGQRISLAKLATESLENTGRPLRVAIDIAIWQFQAQAAKGGTNPAIRTF
FYRLVRLVGLPVQPVFVFDGPNKPLFKRNKRSGRGDGIASAMAKRLIRLFGFPIHQAPGE
AEAECALLQQEGLVDAVLSEDVDTIMFGCSRTFRNWSAEGLRGGKSPTHVTVYDTNEQSL
VASGLDRQGMVLVALMSGGDYLPEGVPGCGLKLACEVARAGFGKSLCSLKAADKTGIDEW
RANLTHELRTNENKFFRTKHKAIVIPDNFPDVKVLRFYTHPAVSSKAAVENLIGSVEWSR
PVDIGGLRRFTDEVFDWTNRPGAVKLIKVLSPNLLAQKLFARYDHITQSLESHRLESLEQ
QELALVQRISAKRSHFSTDGIPELRVFHVPADIVPLDLSQESDKVAEMGRQALALNSDGE
FEGAVPSNNDVEAGEQVARTTFDPTTAQAVWLPESLVKLGVPLCVEDWEERQRAKTNVMT
ASNLAKQRKKKTAGNNTNKAPNTLDKWVKSTKSRPRECPGKNVAVPPVSQSLSHFKLPQP
LPSNITNFGGHQPRESAASKPHTSPNRPLASLPRSKPLTSKSAGKATTIGSMQLSNPWAF
SGSHHTPRTTKPDGHTESFLIETSPEASKDRPVSLDVTCNDALDAGMKNGPQHDGRHSQF
SGDEGLGTARHNGVLARDNRLRTRETDPSRSEPKNMRPLITSKCTTKASQSSAQPKSALS
DSVVGRDATSSSRHDHAGRSHVIARPARPHGTEVRKNLEAVLTAKRSASKGKLIAPRTSA
CGFFKEVDLGDYEAAQLMVHDGEQGVGRQRATSTQQRIWNYSHVAVIDLTGED
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcaaggggatataccgtgaacttggccccggccagaggatctcactcgccaag
ctcgctaccgagagcctggagaacacagggaggcctctccgcgtcgccatagatatcgcc
atatggcagtttcaagcgcaggctgctaaggggggcacaaatcccgctattagaacattc
ttttaccggctggttcgacttgttggactccctgtgcaaccggtgttcgtatttgatggt
cccaataagcctctgtttaaaagaaataagcgctctggacgtggagatggcattgcttca
gccatggccaaacgtcttattcgcctctttggcttccccattcaccaagccccgggcgag
gccgaagcagaatgtgccctcctgcagcaggaaggcttggttgacgctgtcctcagcgaa
gacgtcgacaccatcatgttcggctgtagccgaacatttcgcaactggtcggccgaggga
ttgcggggagggaaatcgccaacacatgtcactgtttatgacactaacgagcagagcctg
gttgcctctggacttgatcgtcagggcatggttctggttgcattaatgagtggtggcgac
tacctccctgaaggtgtgcccggctgcgggttgaagctggcttgcgaggtggctcgagct
ggtttcggcaagagcttgtgcagccttaaagcagcagacaagaccggcattgatgaatgg
agagcaaatctcacccacgaactacgcaccaacgaaaacaagttcttccgcacgaagcat
aaagccattgtcataccggacaacttccccgatgtcaaagtcttgcggttttacacccac
ccagctgtctcctcgaaggcagctgtggaaaacctaatcgggtcggtcgagtggtccaga
cctgtcgatattggcggactcagacggttcactgacgaggtttttgactggacaaatcgg
ccgggcgctgtcaaactgatcaaggtgttgtccccgaatttgcttgctcagaagctcttt
gcacgttacgatcacatcacgcagtcgctcgaaagtcacagactggaatcattagaacaa
caagaattggcgcttgttcagcgcatatcggccaagagaagtcatttcagcacggacggc
atcccggagcttcgagtcttccacgtgccagctgacatcgtgccactggatctatcacaa
gagtcagacaaggtggcagagatgggaaggcaggccctcgcactcaacagtgatggcgag
ttcgagggggcagtgccaagcaacaacgatgtcgaggctggcgagcaagtcgccaggaca
accttcgacccgactaccgcacaagcagtctggcttcccgagagcctcgtcaagttaggc
gtgccactctgcgttgaggattgggaggagaggcagcgagccaagacaaatgtgatgacc
gcatcaaacctggcgaagcaaaggaagaagaagacagccggaaacaacaccaacaaagcc
ccaaatacactcgacaagtgggtgaagtcaaccaaatccaggcctcgagagtgtcccgga
aagaacgttgccgtaccaccggtttcgcagagcctcagtcacttcaaactacctcaacca
ctgccctccaatattacgaatttcgggggccatcaacctcgggaatcagcggcctcaaaa
ccacacacgtcgccgaaccgcccgctagcgtcactgcctcgaagtaagccactcacatcc
aagtctgccgggaaagcgaccaccataggaagcatgcagctatcaaatccatgggcgttc
agtggctcacaccatacgcctaggacaaccaaacctgacgggcacacagagtcgtttctt
atcgaaactagccccgaagcttcgaaagataggccagttagtctggacgtaacatgcaat
gatgccttggatgcggggatgaaaaacggaccgcagcacgatggacgacactcccagttt
tctggggacgaaggtttaggaactgcgcggcacaacggggttttggcgagagataacagg
cttcgcacacgggagacagacccttctcggagcgagcccaaaaatatgcgacccctaatc
acgtcaaagtgcacaaccaaggcatctcagagctcagcacagccgaaatcagctttatca
gacagtgtagtaggccgcgatgccacctcttcgtcgcgccatgatcatgccggtcgaagt
catgtcattgcgcgaccagccaggccccacggtacggaggttaggaaaaatcttgaggct
gtattgactgcaaaaagatccgcaagcaagggaaaacttatcgcaccacggaccagtgcg
tgtggattctttaaagaggtcgacttgggcgattatgaggctgcgcaacttatggtccac
gacggcgaacaaggggtcggacgtcagcgggcaacgagtacccagcagaggatatggaat
tacagccatgtagcggttatcgacttgaccggggaggattga
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