Verticillium alfalfae: VDBG_01878
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Entry
VDBG_01878 CDS
T02227
Name
(RefSeq) transcription factor SPT8
KO
K11360
transcriptional activator SPT8
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_01878
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_01878
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
VDBG_01878
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
VDBG_01878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_SPT8
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_IFT140_1st
PD40
Motif
Other DBs
NCBI-GeneID:
9535316
NCBI-ProteinID:
XP_003007690
UniProt:
C9SBN5
LinkDB
All DBs
AA seq
571 aa
AA seq
DB search
MAAPQATSINALAVTPDLRYWVTGGSDGYIRKYDGPGTINGKQLLTVAQRHPFVDSVVKA
GILMSYWENEEPSPPNPRGNEEHVTSPVYSLAIHSQALWLLSGLESGGINLQSVRHDEGK
RITCLQQHTNAVSVLTLAQDETSVLSGSWDKNILDWDLNTGTVKRRFDGTGNQISAIELR
PLNGTPVPAEASDFQAKNETFSSSNNRPPTNGAFSGANDTFNAAPANTAAAETTEAQASP
AHESLFGGSDTGSLFGETGAGGFGGDDDDEFSQAMNMTMHDASGQDGGMEGGMDHSADMA
TFDSETVPAPAVQPPPSSPLVAKQPPPQPSPVVHPAPIPEPAADPMVTDPTPTEPMGMAE
FEAVTSAQTEQQPPDSPSLVFSSKPAPPPLDPTQSSDTVFLSAAINGTIRIWDRRVQDPV
ARIGTRTGVPPWCMGATWSPDGDWIYAGRRNGTVEEFSIHKARSGWDPERTLKFPAGSGA
VTAVRAMPNGRHLICASHDILRLYDTRDTAAFKNSSVPFLIVPGPPRAGVISSLYLDRTC
RFMISTAGTRGWEGSNTEVLIGYEINVVGEK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccgcaagccaccagcatcaacgccctcgccgtgacgccagacttacgctac
tgggttactggtgggtcggatggctacatcagaaagtacgacggccctggcactatcaat
ggcaagcagctcttgaccgtcgctcagcgccatccgtttgtcgacagcgtcgtcaaggcg
ggcatcctcatgtcatactgggagaacgaggagcccagccctcccaatccgcgtggcaat
gaggagcacgtcacctcgcccgtgtattcccttgccattcattcacaagccttgtggctt
ttgtcgggcctcgaatccggcggcatcaacctgcagagcgtgcggcatgacgagggtaag
cgaataacctgtctccagcagcacacgaacgctgtgagcgtcttaaccctggctcaagac
gaaacgagcgtgctcagtgggagctgggacaaaaacatcctcgactgggacctgaacaca
ggcaccgtcaagcggcgcttcgacggtacaggtaaccagatctcggccatcgagctacgg
cccctcaacggcacaccggtgcccgccgaggcgtctgactttcaggccaagaatgagacc
ttttcgtcgagcaacaaccggccaccaaccaacggcgctttttccggcgccaatgacaca
ttcaacgcagcgcctgccaacacagcagcggccgaaacaacggaagcccaagcgtctccg
gcgcatgagtctctgtttggcggcagtgacactggatccctatttggcgaaacaggcgcc
ggagggttcgggggtgatgacgatgatgaattctcacaggccatgaacatgaccatgcat
gatgcgtcaggtcaggatggtggcatggagggaggaatggaccattccgccgacatggcg
acattcgattccgagacggtgccggccccggctgttcaaccgcctccaagtagcccattg
gtggcgaagcaacccccaccgcaaccttcgccagttgtgcatccggcacctatccccgag
ccagcggccgaccccatggtcacagacccaacacctaccgaacccatgggaatggctgag
tttgaagctgtcacttctgcacagacagagcagcagcctccagactcgccgtctcttgtc
ttctcatccaagccagctccccctccgctcgacccaacccagtcctccgatactgtattc
ttgtcggccgccatcaacggcactatccgcatctgggatcgccgcgtccaagatcccgtc
gcgcggatcggcactcggacaggcgtgccgccgtggtgcatgggcgccacctggagtcct
gacggcgactggatttacgcaggtcggcgaaacggcaccgttgaagagttcagcattcac
aaggcccgcagtggatgggaccctgagcgaaccctcaagttcccagccggctccggcgcc
gtgactgctgtgcgggcgatgccgaacgggcgacacctgatctgcgcttcgcatgatatt
ctgcgtctctatgacacgagagacacggcggcgtttaaaaactcgagcgttcccttcctt
atcgtacccggcccaccgcgtgctggtgtcatttcttcgctgtatctcgatcgcacatgt
cgtttcatgatctcgacggctggcacacgaggctgggaaggctcaaacacagaggtgctg
ataggatacgagatcaatgttgtcggcgaaaaatag
DBGET
integrated database retrieval system
