Verticillium alfalfae: VDBG_01938
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Entry
VDBG_01938 CDS
T02227
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
val
Verticillium alfalfae
Pathway
val04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
VDBG_01938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_01938
Membrane trafficking [BR:
val04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
VDBG_01938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
KxDL
SF-assemblin
Syntaxin-18_N
Mer2
Dynamin_M
Motif
Other DBs
NCBI-GeneID:
9535378
NCBI-ProteinID:
XP_003007750
UniProt:
C9SBU5
LinkDB
All DBs
AA seq
312 aa
AA seq
DB search
MAVASIQDRTSEFKSVLAQAQRRQASNKVGAQRRSLLTDQQKAAANGDGRPRRSDFARQA
AQIGRSITGTMGKLEKLATLARRRTLFDDRPVEINELTFIIKQDLSSINQQISQLQALTR
NQHPKADQEGEHNKNVVFLLQGKLTDVSANFKDVLEERTKNIQASRSRTDNFISSVGQHT
QPPIQQSASPLYGTPNRGTPSPGADLLSLNPASDQQLLMMEEAQPQNSYINQRGEAIEAI
EKTIGELGSIFGQLATMVSEQSEMIQRIDANTEDVVDNVEGAQKELLKYWGRVSSNRWLV
AKMFGGLMIFSL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgcatcaatccaggaccgcacctcggagttcaagtcggtcctcgcccaggcg
cagcgtcgccaggcttccaacaaagtcggcgcgcagcgccggtctcttctgacggaccag
cagaaggccgccgccaacggcgatggacgacccaggaggtcggactttgcccgccaagcg
gcgcaaatcggcaggagcatcacaggcaccatgggaaaactggaaaagctggcgacactc
gcccgccgacgaaccctcttcgacgacaggcctgtcgaaatcaacgagttgacgttcatc
atcaagcaagacttgtcctccatcaaccagcagatctcgcagctccaagcgctgacaagg
aaccaacacccaaaggccgaccaggagggcgagcacaacaagaacgtcgtgtttcttctg
cagggcaagctcacggatgtgtcggcaaacttcaaagatgtgctggaggagcgtacgaag
aacatacaggcatcgcggtcgaggacagacaacttcatctcgtctgttgggcagcacacg
cagccgcccattcagcaatcggcatcgccgctctatggcacgccaaacagaggaacgccg
tctccgggagctgacctcctgtcgctgaaccccgcgagtgaccagcagttgctcatgatg
gaagaggcgcagccgcagaacagctacatcaaccagagaggcgaggctattgaggctatt
gagaagaccatcggcgagctgggcagcatctttggacagctggcgacgatggtatcggaa
cagagcgagatgatccagagaattgacgccaacacggaagacgtcgtcgacaatgtcgag
ggcgcgcaaaaagagctgctcaagtattggggacgagtatcgagcaatcgctggctcgtc
gcaaaaatgttcggcgggctcatgattttttccctgtaa
DBGET
integrated database retrieval system