Verticillium alfalfae: VDBG_01955
Help
Entry
VDBG_01955 CDS
T02227
Name
(RefSeq) RH73529p
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
val
Verticillium alfalfae
Pathway
val03018
RNA degradation
val03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDBG_01955
09123 Folding, sorting and degradation
03018 RNA degradation
VDBG_01955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_01955
03041 Spliceosome [BR:
val03041
]
VDBG_01955
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
VDBG_01955
mRNA degradation factors
5'-3' decay
Lsm complex
VDBG_01955
Spliceosome [BR:
val03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
VDBG_01955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
DUF6897
Motif
Other DBs
NCBI-GeneID:
9535395
NCBI-ProteinID:
XP_003007767
UniProt:
C9SBW2
LinkDB
All DBs
AA seq
141 aa
AA seq
DB search
MADRGSHRGGGGGGGGRGGGHRGRGGGGGGGRGGHGGGQGGAGGDRERPKKENILDLGKY
MDKKITVKFNGGREVTGTLKGYDALMNLVLDDVEEVMRDDEGKENTRSLGLVVARGTLLV
LVSPVDGSEPIANPFAQPEED
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagaggctcgcatcgtggaggaggaggaggaggcggcggtcgtggaggaggt
catcgaggaaggggaggcggcggcggcggaggtcgtggcggacacggtggaggccagggt
ggtgctggcggcgaccgcgagaggcccaagaaggagaacatccttgacttgggcaagtac
atggacaagaagatcaccgtcaagttcaatggcggtcgcgaagtgactggcacactcaag
ggatacgacgctctgatgaatctcgtgctcgatgacgtcgaagaagtcatgagagatgat
gagggaaaggagaacacccgatctcttggcctcgtcgtggcacgcggtacactcttggtc
ctcgtcagccctgtcgacggaagcgagccgatcgccaaccctttcgcccagccagaagaa
gattga
DBGET
integrated database retrieval system