KEGG   Verticillium alfalfae: VDBG_01957
Entry
VDBG_01957        CDS       T02227                                 
Name
(RefSeq) UBX domain-containing protein
  KO
K18726  FAS-associated factor 2
Organism
val  Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:val00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:val03019]
    VDBG_01957
Messenger RNA biogenesis [BR:val03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     VDBG_01957
SSDB
Motif
Pfam: UBA_4 UBX UBA_8 DUF7194 SUB1_ProdP9 U1snRNP70_N SUFU_C
Other DBs
NCBI-GeneID: 9535397
NCBI-ProteinID: XP_003007769
UniProt: C9SBW4
LinkDB
AA seq 515 aa
MATGDVDLGELSPSQQDVLQQYMQVTDQEVKDAIPLLQRSQWNVQIAIAKFFDGEGPDPL
AEALAQQELPRSSARLENLQESMYTSAAQPPRRNPADRPEPAPRIVPMPNTIHRPPFLVG
LLLTPFSLGWAVASRLFRTVWYLFSFLPASIRPRGLTNGAAPGLRNTTGRRMLMPQDTAA
RFKREFEEEYGNSELPWFEGGIAQAQDLAKKDLKFLWVVLMSPEHDDTESFTRETLLAPE
VISFIRDPANNIILWGGNILDSEAYQVAQEYNCTKYPFSALVCLTPKEGSTRMSIVKRLV
GAMPPTVYLSEAQSAINKYTADLAGVRAERTAREMTQNLRHEQDSAYERSLAKDRERARQ
RREAEKAAAEAVQRAEEEAAAATRLAAQRDQWKRWRAARIEAEPAADDKEVVRIALKMPE
SSGAGRIVRRFRKDTSLEALYAFVECYDLLQGELDEKAEEPADYKHKFGFSIASIMPRVV
YEASEDTTMGEKIGRSGNLIVEDVTPHVDESDGER
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggcgacgggagatgttgacttgggagagctttctccaagccaacaagatgtcctgcag
cagtacatgcaggtcacagatcaagaggtcaaagacgccataccactcctacaacgatca
caatggaatgtccagattgccatcgcgaagttcttcgacggcgaagggcctgatcctcta
gccgaggcgttggctcaacaagagctcccgcggtcatctgccagactcgaaaacttgcag
gagagcatgtacacatcagcggctcagccgccgagacgcaacccagccgacagacccgaa
ccggcaccaaggatcgtccccatgcccaacacaatccacaggccgccgttcctcgtcgga
ctcctactgacgcccttcagcctcgggtgggctgttgcctctcgactcttccgcactgtt
tggtacctcttctccttcttgccggcctcaattcgaccgcgagggttgacgaacggagcg
gcacccggccttcggaacaccacgggccgccgaatgctgatgccccaagatacggcagcc
aggttcaagcgcgagtttgaggaagagtacggcaatagcgagctgccgtggttcgaagga
ggcatcgcgcaagcgcaagatttggcgaagaaggacctaaagttcctgtgggttgtgttg
atgtcaccggagcacgacgatacggaatccttcacgcgcgagacgctcctggcaccggag
gtcatcagtttcatccgggatccggccaacaacatcattctgtggggcggcaacatcctc
gactcggaggcctaccaagtggcgcaagagtacaactgcaccaagtacccgttttcagcg
ctggtctgtctgacgcccaaagagggcagcacgaggatgagcatcgtgaagcgcctcgtc
ggcgcgatgccgccgacagtctacctctctgaagcgcagagcgccatcaacaagtacacg
gcggacctggcgggcgtgcgtgccgaaaggacggcaagggagatgacgcagaacctgcgc
cacgagcaagactcggcctacgagcgatctcttgccaaggaccgagagagggctcggcag
cgacgcgaggcggagaaggctgcggcagaggcggtgcagagggcagaggaggaggccgcg
gcggctacgcggctcgcagcgcagcgtgatcagtggaagcgctggcgggcggcgaggatc
gaggccgagccagccgccgacgacaaggaggtggtgcgcatcgcgctcaagatgcccgag
tcgtccggcgccgggaggatcgtgagacggttccgcaaggatacgtccctcgaggccctc
tacgcgtttgtcgagtgctacgacctgctacagggagagctcgacgagaaggccgaggaa
ccggcggactacaagcacaagttcggcttcagcattgcatcgatcatgccgagggtggtg
tacgaagccagcgaggacacgaccatgggagagaagatagggcggtcgggcaatctcatc
gtggaggacgtcaccccgcatgtcgacgagtcagatggtgagaggtga

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