Verticillium alfalfae: VDBG_02005
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Entry
VDBG_02005 CDS
T02227
Name
(RefSeq) RNA polymerase I activation mediator protein
KO
K15163
mediator of RNA polymerase II transcription subunit 12, fungi type
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_02005
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
VDBG_02005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med12
Motif
Other DBs
NCBI-GeneID:
9535607
NCBI-ProteinID:
XP_003007817
UniProt:
C9SC12
LinkDB
All DBs
AA seq
1176 aa
AA seq
DB search
MGNADFFSWTGNHPEDRLSDAVIKNGYFDKAPVTQAETTSAKPAIFPALKHKNGLNLLSS
IFVGVLNQRKHNGQVVAPSAFKPPPRVTLTDTKREVWMRDLANPAISLRRLSRTIPHGIR
GKGLLDHCLSKNVPTERAVWLVRCVGANDLRTVKRKGVNDPERPRSRHSSAALHQAHLTP
TALALFLPRQLLITHDVLRCRETLLASIPIDNDAVLSAYKALNSRNEILIASNGKSQLAN
RQILIKQLDTTFQTLYTNELASSCWNVSEDKRMIVRTVLEWSTSFYRPGQARIYVAASLL
RAWASTGVDITTAILESIGAAPPQGAIPKRLFYQLISELVRTGQFNVREYIIWLMGRGGM
TSSLDTEPDAPCSTRLLIDLPLSALSSSLIATRANLLRRAAFDVAEEARDIDAAWNFIRH
ALGLSSNAEVSPVQRRPMPLAKICRAVSNSSRALQTEVGARLLRTFQTDEYESSSDIHLS
PTAFNHARSILEAAKDFTTMAEMIKLTSRFPDADILASCADTVNVHLATFAAMNVARNLC
DLLLERMKIVNDEQGVRVRPLLVALGALTSRLPGLANTSAHLRKELQQIDQSTAIDACSP
VSDNMAARLQDAEGELNDEIERLLTGGTSLDRPTMDRLFHTVVTRLEGSWAKDSEKQHAY
SALLARLRIFDTQHFDVRMTDWVHHVSIMKTRPTLFDIYPFLISLGCLGLSTIMTTTTVD
PSKVVGGQIGCTSTYMQEVLQLVVSPLPPKNALSQEEAYRFYVQQRVAPQQHHRELAVLV
RNSLIEYSKLQNSEMSTNAPLAQQDLQDDVLDLLRLLVLNDSPTTVQILGTKLADSPLSE
VLASITTRLLAPTRDPSDPMTFETVLELANDFTLPFCQLKLSIGLAASKAGGSSGDEQPP
SHVDMLSKALDQAVETKNMMWTSVLPYLSEEITDHLKRQAQTRLFSLVPSLKTMSTARDS
SEDTIRLSESLLSVVEAIIRGRPALKATQLNMSMVEKLTELWELLAATEIVGKDLRMAII
EHWLPILLKFITLHTTANEPVLSPTQPASMKPPTTAAANDVRARMLVVLSGIMLELDTSA
VRKQALVGNYDRRLSTSPYSSLIIYPKSHACSACAPSSSEGHFKRPLRLTLGYDIFSATP
RLGWSNSCSRIDRRQRHRQMDRPDRRSPLACRVLRD
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatgcggacttcttctcgtggaccggcaatcacccagaggaccgcctgtctgat
gctgttatcaagaatggctacttcgacaaggcacccgtcacccaggccgagacgacctca
gcgaagcctgccatctttccagctctgaagcacaagaacggtcttaacctcctgtcgagt
atttttgtcggtgttctcaaccagaggaaacacaacggacaggtcgtcgcgccctcggcg
tttaagcctccacctcgcgtcacccttaccgataccaagcgggaggtctggatgcgcgat
ctggcgaacccggccatctcgcttcgtcgactgagtcgaaccattcctcacggaatccgc
ggtaaaggtcttctcgatcactgtctcagcaagaacgtacctacagagcgtgcagtgtgg
ctggtccgttgtgttggcgccaatgatttgaggaccgtcaagagaaagggcgtaaacgat
ccagaacgaccccgatcgcgacattctagcgcagctctccaccaagctcacctcactcct
actgcccttgctctcttcttacccagacaacttcttatcacccacgacgtgcttcgttgt
cgagaaaccctccttgcttctattcccatagacaacgatgccgttctgagcgcctacaaa
gccctcaactcacgaaacgaaatactcattgcttcaaatggcaagtctcaactggcgaac
cgccagatccttattaaacagctcgacacgacattccagacattatatacgaacgaattg
gcatcgagttgctggaatgtcagcgaggacaagcgaatgattgtgagaaccgtccttgaa
tggtcgacttccttttaccgtcctggacaagccaggatatatgttgctgcaagcttgctc
cgcgcctgggcttctaccggtgtcgatatcaccacggcgatccttgagtccatcggcgct
gcacctcctcagggggcgatcccaaagcggttattttaccagctgatttccgaacttgtc
agaactggccagttcaacgttcgagagtacatcatctggctcatgggtcgcgggggaatg
acgtcttcgctagataccgaacccgatgctccctgctctacgagactgctcatcgacttg
ccgctgagcgcgcttagctcatcattgatcgcgacccgcgcaaacttgctgcgacgcgcg
gcattcgatgttgcagaggaagccagagatatcgatgccgcgtggaattttatccgtcac
gctctcggcctttcgtccaacgcagaggtatcaccagtacaaaggagaccgatgccactg
gccaagatatgccgtgccgtcagcaacagtagccgggcgttgcagactgaggtcggcgca
cgactgttacggacctttcagacggacgagtacgaatccagctctgacattcatctttct
ccgacggcattcaaccacgctcggtccatactggaggcagcaaaggatttcacgaccatg
gccgagatgatcaagttgaccagcaggttccctgatgcggacatactggcttcgtgcgcc
gacacagtcaatgtccatctggctaccttcgcagcaatgaacgtggcacggaatctctgc
gatctgctactcgagagaatgaagattgtcaacgacgagcaaggagttcgagtcagaccg
ctgctagtggcactgggagccctgacctccaggctccccggcctggccaacacgtcagca
caccttcgaaaggagctccaacagatcgatcaaagcacagcgatcgacgcttgctcgcca
gtctcggacaacatggctgcgcgcctccaggatgcggagggcgagctgaacgacgagatt
gaaaggctactcactggcggcacgagcctcgaccgtcctaccatggaccgacttttccac
accgtcgtcacgcgtctcgagggtagttgggcgaaggactcggagaagcagcatgcctac
agtgcccttctggccaggcttcgcatctttgatactcagcactttgacgtccgcatgaca
gactgggtccaccatgtcagcattatgaagacacgaccaactcttttcgacatttatccc
ttcctcatcagccttggctgcctggggctgtctaccatcatgacaacaaccacagtcgat
cccagcaaagtagtcggaggtcaaattggttgcacgtcaacatacatgcaagaggtcctc
cagctcgtcgtcagtcccttaccgcccaagaacgccctttcacaggaagaagcatatcgc
ttctatgtacagcagcgggtggcaccacagcaacaccacagggagctggctgtacttgtc
aggaattcgctcatcgagtattccaagctgcaaaattccgaaatgtcaacaaatgcccct
ttggcccagcaagatcttcaagacgatgttttggatctactacgacttcttgtgctgaac
gattctccaaccaccgtgcaaattcttggcaccaagcttgcagactcgccgctgagcgag
gtgcttgctagtatcaccacaaggctgctggcgccgactcgggatccgagtgatcctatg
acgttcgaaacggtgctggagctcgcaaacgactttacgctcccattctgccagttgaaa
ttgtcgataggcctggcagcgagcaaagcgggtggcagcagtggagatgaacagcctccg
tctcacgttgacatgttgtccaaagccctggaccaggccgtggagacgaaaaatatgatg
tggacaagtgtgctgccttatctgagcgaggaaatcacagatcatctcaagcggcaggct
cagacgaggctcttcagcctagtaccatcgctcaagactatgtcgactgccagggactca
tctgaggacacgatccgactgtcagaaagtctgctatcggtcgtcgaggctatcattcgt
gggcggccagcactgaaggctactcaactcaacatgtccatggtagaaaagttgacggag
ctttgggagttgctggcggccacggaaatagttgggaaggacttgaggatggcgattatc
gagcattggctgcccatcttgttaaagttcatcacacttcacacgacggcaaacgagccg
gtgttgtcgcccacgcagccagccagcatgaaaccacccacgacggcggcggccaatgac
gttcgcgcacgcatgcttgtcgtgctgtccggcatcatgcttgagcttgatacatcagct
gtgaggaagcaagctctggtcggcaactacgacaggcgactttcgacctcgccctattcc
tcgttgatcatttacccgaagagtcacgcctgcagtgcgtgcgcgccatcctcatcggag
ggtcacttcaaacgcccgttacgtctgacgctaggatacgatatcttttcagctacgccg
cgccttggatggagcaattcatgctcgcgcatcgacagacgccaacgccaccgtcaaatg
gaccgcccagaccgaagatccccattagcgtgcagggttctgcgagattga
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