Verticillium alfalfae: VDBG_02161
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Entry
VDBG_02161 CDS
T02227
Name
(RefSeq) staphylococcal nuclease domain-containing protein
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
val
Verticillium alfalfae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNase
TUDOR
SMN_Tudor
Motif
Other DBs
NCBI-GeneID:
9536009
NCBI-ProteinID:
XP_003007973
UniProt:
C9S9I9
LinkDB
All DBs
AA seq
842 aa
AA seq
DB search
MSKTFFAKVKSVLSGDTLILTNPQNPKAERTFSLAFVDAPRLRKEGDEPYAFQAREYLRE
NVGKQVQCTVLYTVPSGRDFGTVLLSREGPSLPDEAVKAGWLKVREDAGRKEESEEILER
LDLLRGLEGQARSESIGVWSGSGGSIQVQNDLGGPEFMNQWKGKTVDGIIERVLSGDRLL
VRLLLSDKKHAQVMTLLAGVRTPATERTVQSTGQTQPAEEFGNEAKAFVEERMLQRKVKV
DIVGASSQGQLVATIIHPNGNKNIAEFLLSEGLARCNDFHSTMLGEKMAPLRAAEKTAQG
KKIRLHQNHVAKEGGAQSDMTVTKIVGADTIIVRSKEGKTEKRINFSSIRGPRAGEPTEA
PYRDEAKEFLRKKVIAKHVRVSIDGHKAAADGFEARDVATVTEKNQNIGLLLVEHGYATV
IRHRKDDTDRASNYDELLAAQEKAKEEKKGIWSGKAPKIKQYIDVSESLQKAKLQLAGLQ
RQKKVAGVVDFVKSGSRFTILVPREGIKLTLVLGGVRAPRAPRNNGEGDFAKVLVEEGLA
SVHGYSAEKSGNAGELFPAEQRAKEARKGLWKDWDPSQDEQVEEAAPAESQDTPESYDNK
AKDYRDVVVTEMDGNGRLKIQEIGKGTAALTTMMNEFKKFHIDSKNAKPLGDAPKTGEFV
AAKYSVDGQWYRGRVRSNDRANKVAEVLFIDYGNSEKIAWKDLRPLDQPQFSTQKLKSQA
SDASLSFVQLPTAPEYFREAQDFIANITGGKELVASFDFVDTKEGVSYITLYDYNSGSGK
PGPNDSINKEVLAAGAGLVPTKLKAWERSGQHASYLKHLKEVESQAKQERQGMWEYGDIT
ED
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagacatttttcgcgaaggtcaagagcgtgctctcaggcgatacgctgatcctg
acgaaccctcaaaaccccaaggccgagcgaactttctccctggccttcgttgacgcccca
cgtctgcgcaaggagggcgacgaaccctacgccttccaagcccgcgaatatctccgagaa
aacgtcggcaagcaggtccaatgtaccgtcctctacaccgttccctctggtcgtgatttt
ggcaccgtcctgctgtcaagagagggcccatcactacccgatgaggctgtcaaggccggc
tggctgaaggttagggaagacgctggtcgcaaagaagagtcggaagagattctcgaacgc
cttgatctgcttcgtggcctcgagggccaggccaggagcgagtctatcggtgtctggtct
ggctctggcggctcgatccaggttcaaaatgaccttggcggccctgagttcatgaaccaa
tggaagggcaagacggttgacggcatcatcgagcgtgtcctcagcggcgatcgtcttctc
gtccgcctgctgctctctgacaagaagcacgctcaggtcatgacgttgcttgctggtgtg
cgcacgcccgccacggagaggacagtacagtccaccggccagacgcagccggcggaggag
tttggcaacgaagcgaaggcttttgtcgaggagcgtatgcttcagcgcaaggtcaaggtt
gacattgtcggtgccagctcccagggccagcttgtcgctaccatcatccaccccaacggt
aacaagaacattgccgagttcttgctgtcagaaggtcttgctcgctgcaacgatttccac
tcgacgatgctcggcgagaagatggccccgctgcgcgcggccgagaagacggctcagggc
aagaagatccgcctgcaccagaaccacgtcgccaaggagggcggcgctcagtctgacatg
accgtcaccaagattgtcggtgccgacactatcatcgtccgcagcaaggaaggaaagacg
gagaagcgcatcaactttagcagcatcaggggcccccgcgctggcgagccgaccgaggcg
ccgtacagagacgaggctaaggagttcctgcgcaagaaggtcatcgctaagcacgtccgt
gtcagcattgatggccacaaggccgccgctgatggcttcgaggctcgcgacgttgctact
gtgacggagaagaaccaaaacattggtctgctcctggtcgagcatggctacgccacggtc
atccgccaccgcaaggacgacacggatcgcgcttccaactacgacgagcttcttgcggcc
caagagaaggccaaggaggagaagaagggcatctggtcgggcaaggcgcccaagatcaag
cagtacatcgacgtctccgagtctctgcagaaagccaagctgcagctggctggtctccag
cgccagaagaaggttgctggtgtggttgactttgtcaagtctggttcccgcttcaccatt
ctagttcctcgcgagggcatcaagcttacccttgttctgggaggtgtgcgtgccccaagg
gcgccccgcaacaacggagaaggcgacttcgccaaggtccttgtcgaagagggtctcgcg
tccgtgcacggctactctgcggagaagtctggtaacgctggtgagctgttcccggcagag
cagcgtgccaaggaggctcgcaagggactctggaaggactgggacccttcgcaggacgag
caggtcgaggaggccgcacccgccgagtcgcaggacacgcccgagtcgtatgacaacaag
gccaaggactaccgcgatgttgtggtcacggagatggacggcaacggcaggcttaagatc
caggagattggcaagggcactgcagcgttgacgacgatgatgaacgagttcaagaagttc
cacatcgactcgaagaacgccaagcccctgggagacgcgcccaagacgggcgagttcgtc
gcggccaagtactcggttgacggccagtggtaccgcggacgcgtccgctccaatgaccgg
gccaacaaggtggctgaggtgctcttcatcgactacggcaactcagagaagattgcgtgg
aaggacctgcgcccccttgaccagccgcagttcagcacgcagaagctcaagagccaggcc
tctgacgcgtccctgtcgtttgtgcagctgccgacggcgcccgagtacttccgcgaggcg
caggactttatcgccaatatcaccgggggcaaggagctggtggcgagctttgactttgtc
gacacgaaggagggcgtcagctacatcacgctgtacgactacaactcgggctccggcaag
ccgggccccaacgactcgatcaacaaggaggtcctcgccgccggtgccggtcttgtgccg
acaaagctcaaggcgtgggagcgcagcggacagcacgcgtcatacctgaagcacctcaag
gaggtggagtcgcaggccaagcaggagaggcagggcatgtgggagtacggcgacattacg
gaggattag
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