Verticillium alfalfae: VDBG_02178
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Entry
VDBG_02178 CDS
T02227
Name
(RefSeq) pre-mRNA-splicing factor ISY1
KO
K12870
pre-mRNA-splicing factor ISY1
Organism
val
Verticillium alfalfae
Pathway
val03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDBG_02178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
val03041
]
VDBG_02178
Spliceosome [BR:
val03041
]
Complex B
Other components
Prp19-related factors
VDBG_02178
Complex C
VDBG_02178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Isy1
Motif
Other DBs
NCBI-GeneID:
9536027
NCBI-ProteinID:
XP_003007990
UniProt:
C9S9K6
LinkDB
All DBs
AA seq
245 aa
AA seq
DB search
MARNSEKAQSMLFRFREAQAADLGIIDVGRTRRPKMITEVTAIPTCEKWRGQVLKEISRK
VSRIHETSLSDYQVRDLNDEINKLMREKYMWEVQIRNLGGPNYMRGGAKMYDEAGREIPG
GGKGYRYFGRAKELPGVKELFEAARSLGNEDKAAKGREQRPRVYVDAAYYGYAPDEEDDE
LLQYEAQKEAEATEHMANTGKQEAPPGWEPLPGDSGDGQVWVLPTLEEVQEELIDRRRKR
LLDQL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaactcagaaaaagcccagtcgatgctcttccgcttccgcgaggcccaggcc
gcggacctcggaatcatcgacgtcgggcgcacacggcggcccaagatgatcacagaggtg
acggcgatcccgacgtgcgagaagtggcgcggccaggtgctcaaggagatctcccgcaag
gtgtcgcgcatccacgagacgagcctcagcgactaccaggtgcgcgacctcaacgacgag
atcaacaagctcatgcgcgagaagtacatgtgggaggtgcagatccgcaacctcggcggg
cccaactacatgcgcggcggcgccaagatgtacgacgaggccggccgcgagatccccggc
ggcggcaaggggtaccgctacttcggccgcgccaaggagctgccgggcgtcaaggagctg
ttcgaggccgcgcggtcgctggggaacgaggacaaggccgccaagggccgcgagcagagg
ccgcgtgtctacgtcgacgccgcctactacggctacgcgcccgacgaggaggacgacgag
ctgctgcagtacgaggcccagaaggaggccgaggcgaccgaacacatggccaacacgggc
aagcaggaggcgccgccaggctgggagccgctgcctggtgattcgggggacggccaggtc
tgggtgctgccaacgttagaggaggtgcaggaggagctgatagaccggaggagaaaacga
ctgctcgatcaactatga
DBGET
integrated database retrieval system