KEGG   Verticillium alfalfae: VDBG_02189
Entry
VDBG_02189        CDS       T02227                                 
Name
(RefSeq) WD repeat-containing protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
val  Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:val00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:val03009]
    VDBG_02189
Ribosome biogenesis [BR:val03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    VDBG_02189
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 9536039
NCBI-ProteinID: XP_003008001
UniProt: C9S9L7
LinkDB
AA seq 417 aa
MGRGLGAARRSTPGTTLSRRVVVGAGGRPLVTGRVMKQTPRIGLDLISSPNTLRHIYSDQ
HIPVMLSEEFFSAVCGPPIAANTAISKDVGLHCHTLTPSYAVKSNYKKSAAPTNCLAISP
SHVFAAQNEKSQIHVYSKARGTQEVTVTLGERIRSLALIGDVLAVGTVDGSLMLWEGRHH
LARRQPERESRNQPLRLSHVPLCVALDPCSRAVLVSCEDGSLYLVELFGAKPLVGQHSAE
VSSTAVQVTSPLGVADAECGPASCLAISHDGTTVLTGHTKGKILQWQLTDNGHPTELTDL
NASVTNLVFPPLTQATQTTRPVTVIKPSLAERQYTFTAQLEADLAPPSRFQNMLNSAGFP
DDVLEKAILSFTEPSATQSGNSAEAQKQIDELKEIIEGQKALHKATLQKLADAKSSK
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggggaggggtttaggtgcagcgagacgatccacgccaggcacaacgctatcgaggaga
gtcgttgtcggagctggcggcaggccgttggtaactggtcgagtcatgaagcaaacaccc
agaatcggtctcgatctcatttcctcgcctaacacactaaggcacatctactcggaccaa
catatccccgtcatgctgtctgaggaattcttctccgccgtttgcggcccccctatcgcc
gccaatacggccatctcaaaagatgtcggccttcattgtcacactctgacgccgagctat
gctgtcaagtccaactacaaaaaaagcgctgctccgacgaattgcttggccatcagcccg
tcccacgtgtttgccgctcaaaacgaaaagtcccagatccatgtgtactccaaggcgcgt
ggcacccaggaggtgaccgtcaccttgggtgaacgcatcagaagcttggccctgatcggc
gatgtccttgcagttggcacagtcgacggaagcctcatgctgtgggaggggcgccatcac
ctcgctcgtcgtcagccagagcgtgaatcccgaaaccagcctctgcgtctcagccacgtc
cctctctgcgtcgccctcgatccctgctcgcgcgccgtcctcgtctcgtgtgaggacggc
tcactctacctcgtcgagctttttggtgccaagcctctggtcggccagcacagcgccgaa
gtctcctcgaccgccgtccaagtcacttctccgctaggtgtcgccgacgccgagtgcggc
ccagcttcgtgcctggctatcagtcacgacggcacgaccgtccttaccggccataccaag
ggcaagattcttcagtggcagctcaccgacaatggccacccgacagaactgacggacctc
aacgcctccgttacgaacctcgtgttcccacctcttacgcaggcgacccagacgacaagg
cccgtcacagtcatcaaacccagccttgccgagaggcagtatacctttacggcccagctc
gaggctgatctggcaccgcccagcaggttccagaacatgctcaacagcgcagggttccca
gatgacgttctggagaaggctatcctgtcctttacagaaccatcggcaacgcagtctggc
aacagtgctgaggcgcagaagcagattgatgagctgaaagagattatcgaaggtcagaag
gcgctgcataaggccacactgcagaagctggctgatgccaaatcttcaaaatga

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