Verticillium alfalfae: VDBG_02189
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Entry
VDBG_02189 CDS
T02227
Name
(RefSeq) WD repeat-containing protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_02189
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
VDBG_02189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
9536039
NCBI-ProteinID:
XP_003008001
UniProt:
C9S9L7
LinkDB
All DBs
AA seq
417 aa
AA seq
DB search
MGRGLGAARRSTPGTTLSRRVVVGAGGRPLVTGRVMKQTPRIGLDLISSPNTLRHIYSDQ
HIPVMLSEEFFSAVCGPPIAANTAISKDVGLHCHTLTPSYAVKSNYKKSAAPTNCLAISP
SHVFAAQNEKSQIHVYSKARGTQEVTVTLGERIRSLALIGDVLAVGTVDGSLMLWEGRHH
LARRQPERESRNQPLRLSHVPLCVALDPCSRAVLVSCEDGSLYLVELFGAKPLVGQHSAE
VSSTAVQVTSPLGVADAECGPASCLAISHDGTTVLTGHTKGKILQWQLTDNGHPTELTDL
NASVTNLVFPPLTQATQTTRPVTVIKPSLAERQYTFTAQLEADLAPPSRFQNMLNSAGFP
DDVLEKAILSFTEPSATQSGNSAEAQKQIDELKEIIEGQKALHKATLQKLADAKSSK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggggaggggtttaggtgcagcgagacgatccacgccaggcacaacgctatcgaggaga
gtcgttgtcggagctggcggcaggccgttggtaactggtcgagtcatgaagcaaacaccc
agaatcggtctcgatctcatttcctcgcctaacacactaaggcacatctactcggaccaa
catatccccgtcatgctgtctgaggaattcttctccgccgtttgcggcccccctatcgcc
gccaatacggccatctcaaaagatgtcggccttcattgtcacactctgacgccgagctat
gctgtcaagtccaactacaaaaaaagcgctgctccgacgaattgcttggccatcagcccg
tcccacgtgtttgccgctcaaaacgaaaagtcccagatccatgtgtactccaaggcgcgt
ggcacccaggaggtgaccgtcaccttgggtgaacgcatcagaagcttggccctgatcggc
gatgtccttgcagttggcacagtcgacggaagcctcatgctgtgggaggggcgccatcac
ctcgctcgtcgtcagccagagcgtgaatcccgaaaccagcctctgcgtctcagccacgtc
cctctctgcgtcgccctcgatccctgctcgcgcgccgtcctcgtctcgtgtgaggacggc
tcactctacctcgtcgagctttttggtgccaagcctctggtcggccagcacagcgccgaa
gtctcctcgaccgccgtccaagtcacttctccgctaggtgtcgccgacgccgagtgcggc
ccagcttcgtgcctggctatcagtcacgacggcacgaccgtccttaccggccataccaag
ggcaagattcttcagtggcagctcaccgacaatggccacccgacagaactgacggacctc
aacgcctccgttacgaacctcgtgttcccacctcttacgcaggcgacccagacgacaagg
cccgtcacagtcatcaaacccagccttgccgagaggcagtatacctttacggcccagctc
gaggctgatctggcaccgcccagcaggttccagaacatgctcaacagcgcagggttccca
gatgacgttctggagaaggctatcctgtcctttacagaaccatcggcaacgcagtctggc
aacagtgctgaggcgcagaagcagattgatgagctgaaagagattatcgaaggtcagaag
gcgctgcataaggccacactgcagaagctggctgatgccaaatcttcaaaatga
DBGET
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