KEGG   Verticillium alfalfae: VDBG_02254
Entry
VDBG_02254        CDS       T02227                                 
Name
(RefSeq) hypothetical protein
  KO
K14325  RNA-binding protein with serine-rich domain 1
Organism
val  Verticillium alfalfae
Pathway
val03013  Nucleocytoplasmic transport
val03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VDBG_02254
   03015 mRNA surveillance pathway
    VDBG_02254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:val03019]
    VDBG_02254
Messenger RNA biogenesis [BR:val03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     VDBG_02254
SSDB
Motif
Pfam: RRM_1 RRM_5 RBD_AKAP-17A Nre_N RRM_7 RRM_PARP14_3
Other DBs
NCBI-GeneID: 9533917
NCBI-ProteinID: XP_003008066
UniProt: C9S9T2
LinkDB
AA seq 310 aa
MATRSMSRDLDRAPTRSPTPASDYSRNRRRQLDSRSPSRSRSPEPRRNGRYRSETRSRSP
VRRGESRGRSPTPVKSTKIVVERLTKNVNEDHLYEIFGQFGRVKDLDLPINRMGTNRGTA
YILYDDEADAEDAIANMHEAQLDGAVINVSIVLPRRKLSPAPPLARRGAGIDPRNPHPGP
RGGGGRGGSFGGGGGRGGGPNGPSSRFGPNSDTYRPRSASRSPSRSPAANAGRARGGSRY
RSRSRSHTPSGSRSPSRTPPRRRGGGGGGGGGGVGGGRNRRDNRRRSPSRDSYDDRSRSR
SRSRDRRSRH
NT seq 933 nt   +upstreamnt  +downstreamnt
atggcaacccgttccatgtcgcgggaccttgaccgggcacccactcgctctccaacgccc
gcctccgactactctcgcaaccgtcgccggcagctcgactcgcgctcgccttcgcgctcc
cgatcaccagagccccgccgaaacggcaggtacaggagtgagacacgctcgcgaagccct
gtgcgacgaggcgaaagtcgtggccgcagcccaacacccgtcaagagcacaaagattgtc
gtcgagcgcctaaccaagaatgtgaacgaagaccatctctacgagatcttcggccagttc
ggccgcgtgaaggatctcgatctacccatcaacagaatgggtaccaatcgcggcacagcc
tacattctctacgatgacgaggccgacgctgaagatgccattgccaacatgcacgaggcc
caactcgacggcgccgtcatcaacgtctccatcgtcctgccgcgccgcaaactctctccc
gcaccgcctctagctcgccggggtgccggcatagatcctaggaacccacacccgggccct
cggggaggtggcggccgcggtggttcatttggcggtggtggtgggcgtggtggcggcccc
aacggtccctcgagccgcttcggacccaattcggatacataccgtccccgatctgcctcg
cggtcgccgtcgcggtcgccggcagcgaatgcgggcagggcacgtggtggtagtcgttac
aggagtcggtcccggtcgcacacaccttcaggatcaagatcaccgtcgagaacaccacca
agacgtcgtggagggggtggtggcggtggcggcggcggcgtcggcggcggtcgcaacagg
agagataatcgtcggagaagccccagccgcgattcctacgatgacaggtctaggagccgc
agtcgcagtcgagaccgtcgttctcggcattag

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