Verticillium alfalfae: VDBG_02259
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Entry
VDBG_02259 CDS
T02227
Name
(RefSeq) nucleoporin nup44
KO
K14308
nuclear pore complex protein Nup54
Organism
val
Verticillium alfalfae
Pathway
val03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VDBG_02259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_02259
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
VDBG_02259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_57_C
HOOK
DUF7653
YliH
TFIIA
CDT1_C
Motif
Other DBs
NCBI-GeneID:
9533922
NCBI-ProteinID:
XP_003008071
UniProt:
C9S9T7
LinkDB
All DBs
AA seq
326 aa
AA seq
DB search
MSLFGKPAGQAGGLFGASTFGQSQQQQQPQQQQQAAPTLSLFGGQQNQTNQQQNQGTSSL
FGGSFAQPQQQQQQQQVQQSQQQQMPSLAQSQAQLSSSLWQPGSETPQNQKPPMEQIATT
FRKWHPGDPSCVFRHYFYNKVDNAAVPFYQPGPNEDPKEWEEALQRKPGQGYIPVLGAGF
SGVADRLQTQKRVVGEHNVRLHQINASLDAILSRHDLETSVRALAARRRHVALRERCLAL
AARVQVLRNRGYALSGDEDDLRLKLVELDRAVQDPALSAREEELWSRPYCAAWVLEDYEK
QIQHLKKEVESITKDFQEWESDGAAR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttttgggaagcccgcagggcaagctggcggcttgtttggtgcaagcacattc
ggccagtcccagcaacaacaacaaccgcaacagcaacagcaagccgcgccgaccctcagc
ctgttcggtggccaacagaaccagacgaatcagcagcagaatcagggcacatcgagtctt
tttggaggatcctttgcgcagccacagcagcagcagcagcaacagcaagttcaacagtca
cagcagcagcaaatgccgagcctagcacagtcgcaagcccagctgtcgagctccctctgg
caaccaggcagtgaaacaccacaaaaccagaagcccccgatggaacagatcgcaaccacg
tttcgcaaatggcatcctggtgaccccagctgcgtgttccgccactacttctacaacaag
gtcgataacgccgcggttcctttctaccagcccggccccaacgaagaccccaaggagtgg
gaggaggccctgcagcgcaagcctggccagggctacatccccgtcctcggcgccggcttc
tcaggtgtcgccgaccgcctgcaaacgcagaagcgcgtggttggcgaacataacgtccgc
ctgcaccagatcaatgctagtctcgatgccatcctctcgcgacatgatcttgagacgagc
gtgcgggcgctggcggcgcggagacgacacgtcgcactgcgggagcgctgtctcgcgctg
gcagcccgcgtccaggtgctgcggaatcgtggctacgccctcagcggcgacgaggatgac
ctgcggctcaaacttgtggaattggaccgcgcagtgcaagacccggcactgagcgcgagg
gaggaggagctgtggagcaggccttattgtgctgcgtgggttctcgaagattacgagaag
cagatccaacacctcaaaaaggaagttgagtcgatcacgaaagactttcaagagtgggag
agcgacggtgctgcgcggtag
DBGET
integrated database retrieval system
