Verticillium alfalfae: VDBG_02292
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Entry
VDBG_02292 CDS
T02227
Name
(RefSeq) ATP-binding cassette sub-family B member 5
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
val00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VDBG_02292
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_02292
04147 Exosome [BR:
val04147
]
VDBG_02292
04090 CD molecules [BR:
val04090
]
VDBG_02292
Enzymes [BR:
val01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
VDBG_02292
Transporters [BR:
val02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
VDBG_02292
Exosome [BR:
val04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VDBG_02292
CD molecules [BR:
val04090
]
Proteins
VDBG_02292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_29
AAA_22
AAA
AAA_25
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
9532576
NCBI-ProteinID:
XP_003008104
UniProt:
C9S9X0
LinkDB
All DBs
AA seq
1045 aa
AA seq
DB search
MSEESIGNPAASDGGTTRAGTTDSRNGGGIPQHTSAMSAFLRVFSYGTPTIYLLQAIAAI
AACGSGVALAMVNLVLGNFISLLSGFSSGNDVPDDFMSLVSKQSLYFVYIGIARFGCIYI
YSTAMTYTALRLGRNLRRDYMRSALRQEISFFDFGSVGSISMQATSNGRLIQSGTSEKLG
QMIQATATFVAAFIIAFVSQWKLTLILICIVPALILMVGTAGGIDAGIETSILKVYAQAG
AFAESSLGNIRAIKAFSLSSRIVDQYTKYLDEARTLGQKKNVLYGLLFAGEYFVMFAGMG
LAFWQGITMIARGEVDDIGTVFTVLFSVVIAAAMLNSVAPNMVTFTRAATAASELFSLID
RKSNIDPFDPAGHTIAEVDGSINIRGLSFSYPTRPDITVLDDFSLYIPAGKVTALVGASG
SGKSTIIGLLERWYNPSSGEITLNDRPLSALNLQWLRTNMRLVQQIKEPVLFNGTVFDNI
SNGLVGTAWEHETRDERLVRIKDAAKTAFAHDFIENLPQGYETRIGERGGLLSGGQKQRI
AIARSIISQPKILLLDEATSALDPHAEEIVQKALDEASKDRTTIVIAHKLKTIQAADNIV
VMKQGKIVEQGQHQDLVTLGGAYAVLVKAQDLSLNEKANESESDQEEDRNDSTLEKTHSL
GGHDTLAHQNLISLSKREDYELAKTSGILSTAAKLVKSTPDLRWWYVLALFTSILGAGVY
PGQALLLGKVMDVFYPELDQSRGNFFALMFFIMAICLLFVYMAMGWVSNHIAQAYGHDVR
KRMFAAYLQQDLRFFDRPENTIGALRADSIPTRILICSVLSIVVSWKLGLVGVFAGIPPM
ILGGYIRIRVETKMDADIDAKFSKSFTKANSSANYFFWLCGLEATVRETDQNANVVPANG
CTSYDLDGVQFSYPLAPDNRVLKGVSMTIRPGQYVAFVGASECAKRQRIAIARALIRNPR
VILLDEATSALDTESERIVQAALMEAASTDNKITIAVAHRLSTITNADRIFVFYSGRIVE
AGTHSELLARGEAHSVWISGSTVSF
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaatcgatcggcaaccctgctgccagcgatggcggaaccacccgtgccggc
acgacagattctcgcaatggcggaggcattccacagcacacgtccgcgatgtcggctttc
ttaagagtgttttcttacggcacaccaaccatttatcttcttcaagcaattgccgccatc
gcggcatgcggctctggggtcgccctcgccatggtcaatctcgtcctcggaaacttcatc
agcctgttaagcgggttcagctcgggcaacgacgtccctgatgactttatgtcgctggtt
tctaagcaatcactttactttgtatacataggaatcgctcgcttcggttgcatctacatc
tactcgacagccatgacatataccgctctacgactgggccgcaatctgcgacgcgactac
atgcgttccgcgcttcgtcaggaaatcagtttcttcgacttcggcagcgtaggatcaata
tccatgcaggctacctcaaatggccgattgattcaatctggcacctcggaaaagctgggg
cagatgatccaggctactgcaacctttgtcgcggcattcatcattgcgttcgtgagccag
tggaagctcacactcatattgatctgcattgtgccggctttgatcctcatggtcgggact
gctggtggtatcgacgcaggcatcgagacaagcattctcaaggtctacgctcaagccggt
gccttcgccgaatcatcactgggaaatatccgggccatcaaagccttcagtctaagttca
aggatcgttgatcagtacaccaagtacctggacgaggcccgtaccttgggccaaaagaag
aatgttctgtacggccttctatttgccggagagtactttgtcatgtttgccggcatgggt
cttgccttttggcagggcatcacgatgattgctcgcggagaggttgacgatatcggtacg
gtttttactgtgcttttctctgtcgtgattgccgcagccatgttgaattctgttgctccc
aacatggtgacttttaccagagcggcgacagccgcctccgaattgttctctcttattgat
cgcaaatcgaatattgatccatttgatcctgcgggacataccattgctgaggttgacgga
tcgatcaacatccgcggactgtctttcagctacccaactcgaccggatatcactgtgctg
gatgatttcagcctctacattcccgccggaaaggttacggctctcgtgggagctagtggt
tcaggaaaaagtacgatcatcggactgctagaaaggtggtataaccctagcagcggcgag
attaccctcaacgataggcctctttcagcactcaacctgcagtggcttcgtacaaatatg
agactggttcaacagataaaggaacctgtgctcttcaatggtaccgtgtttgacaatatt
tccaacggtctcgttggcactgcgtgggaacacgagactcgagacgagcgactggtacgg
ataaaggatgcggctaagacggcattcgcgcacgacttcatcgagaacctcccgcaagga
tatgaaacgcgcatcggtgagaggggaggtctgctctccggcggccaaaaacagcgtatt
gctattgcacgaagtatcatctcgcaacccaaaatccttctgctggacgaagcgaccagc
gccctggacccgcacgccgaggaaattgttcagaaagcactggatgaggcgtcgaaagac
cggaccacaatcgtcatcgcgcacaagctcaagaccattcaagctgcggataacattgta
gtcatgaagcaaggaaagattgtcgaacaaggccagcaccaagacctcgttaccctaggc
ggtgcatacgcagttctcgtcaaggctcaggatctgtcactcaacgagaaggcaaatgaa
tctgaatcggaccaagaagaagatcgcaatgactcgacccttgaaaagactcattcactg
ggtgggcacgatacgcttgcgcatcaaaacttgatctcgctcagcaagcgagaagattat
gagctcgccaaaacttctggcatcttgtctacagctgcgaagcttgtcaagagcacacct
gatctacggtggtggtatgttcttgccctgttcacaagcattttaggagctggtgtgtac
cctggccaggcccttttgttgggcaaggtcatggacgtgttttaccccgagctggaccaa
agccgcggcaatttctttgcactcatgttcttcataatggccatctgccttctgtttgtc
tacatggccatggggtgggtcagcaatcacattgctcaggcttatggccacgatgtgcgc
aagcgaatgtttgctgcctacctacaacaagacttgcgcttctttgaccgccccgagaat
acgataggcgccttacgagccgactcgattccgacgcgcattcttatttgctcagttctt
tccatcgtcgtgtcatggaaactcggtcttgtgggcgtttttgctggcattcctcccatg
attcttggtggttacattcgcatcagggtcgaaacgaagatggacgccgatattgatgcc
aagttttcgaaaagcttcacgaaggcaaactcttctgcaaactatttcttctggctttgc
ggcctggaagccactgtcagggagacggaccaaaacgcaaatgtcgtacctgcgaacggc
tgcacatcctacgatctcgatggtgtgcagttctcatatcctcttgctcctgataaccgt
gtgctcaagggcgtatcaatgaccatccgtccaggacaatacgttgcttttgtgggggcc
tcggagtgtgcaaaacgacagcgtatagcaattgctcgagcacttattcgcaatccgagg
gtcattctcctggatgaagccacaagtgctttggacaccgagtccgaaagaatagtgcaa
gccgctctgatggaagctgcttcaaccgacaacaagatcacgattgcagttgctcatcgt
ttgtcaacaatcacaaacgcagatcgtattttcgtcttctatagcggacgaattgttgag
gcggggacacactcagaacttcttgcccggggcgaagcacactctgtgtggatctctggg
tcgactgtttctttctag
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integrated database retrieval system
