Verticillium alfalfae: VDBG_02348
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Entry
VDBG_02348 CDS
T02227
Name
(RefSeq) short-chain-fatty-acid-CoA ligase
Organism
val
Verticillium alfalfae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
9532634
NCBI-ProteinID:
XP_003008160
UniProt:
C9SA26
LinkDB
All DBs
AA seq
601 aa
AA seq
DB search
MLLTPSRCLQRSPRSLERLLRLGDPASRRCLSAMRDSLSLGPDQVGFSAGGGHHKGESQA
LTMGQPALLPHTIPEHFASIVSQFGDRPAVVARSPTAVAPDLPTSVADFRETSLTYEALD
LLSNRLANSLRSLGVKKGDRLAVSLGNCSEFAALTYAAFKLGAILVPLNPGFNVKQVTAG
LDFLGVEVLIIGAVTDLAYKPCRGRSNEELLRSLVPNLEGTKVESPTVPSLKTIVVLDNT
TSHPLVNFPLKSYRALTPFDRLIDGSLNAITPDAPLSASDTINIQFTSGTTSTPKAAMLT
HTGILNNGAFIAGRMGLNPSDRIVVPPPLFHCFGCILGYMATATTGAAILFPSPAFDPSA
TLRTVAAHDATGLYGVATMFIAVLDALAAGVVDPADLPRNLTKGIAAGSSVPEALMRRLY
ATLGLRDLVICYGQTETSPVSCMTQPDDPLGLRTTTVGRAMPHTAVKVVDPLDRSRILPR
GEKGELAAAGYLVMRGYWGDAARTAEDRIDESDGRTWMYSGDEASMDANGYVAITGRIKD
LIIRGGENIHPLEVENCLLQHPLVSDASVVGVPCDKLGENVAAFVVRAKAGSAGGKGTHG
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgaccccttcacgatgcctgcagcgcagccccaggtctctagagagactgctc
agactcggagatccggcttcgcgaagatgtctctccgcaatgagggacagtctcagtctt
ggccctgaccaggtaggtttctcagcgggggggggccaccacaagggagaatctcaagct
ctaacaatgggccagcctgcgttgctaccccacacgattccggagcacttcgcatccatc
gtttctcagttcggcgacaggccagcagtcgtcgctcgctcgcctacagcagtggcacca
gacctgcccacttcggtggcagactttcgggagacgagcctcacctatgaagccctggac
ctgctctccaatcgtctcgccaacagcctgcgctctctcggcgtcaaaaaaggcgaccgt
ctggccgtgagcctcgggaactgcagcgagttcgccgccttgacctatgccgcgttcaag
ctcggcgccatcctagtccctcttaatcctggcttcaacgtcaagcaggtgacggctggc
cttgactttctcggcgtcgaggtgctcatcattggagccgttacagacctggcttataag
ccgtgccgcgggcgaagcaatgaggagttgctgcggtcgctcgtaccgaacctcgaaggg
accaaggttgaatcccccaccgtcccgtcactcaagacgattgttgttctcgacaacaca
acgtctcatcccctcgtcaactttcctctcaaatcataccgcgccctgactccttttgat
cgtctcattgacggttccctcaacgctatcacaccagacgcgccgctgtcggcgtcagac
acgatcaacatccagttcacctcgggcacgacatcaacacccaaggccgccatgctcaca
cacacgggcatcctcaacaacggcgcgttcattgctggccgcatggggctcaacccctcc
gaccgcatcgtcgtgccaccgcctctcttccactgcttcggctgcatcctcggctacatg
gccacagccacgacgggtgccgccatcctgtttccctcccccgccttcgacccctcggca
acactgcgaaccgtcgccgctcacgacgcgacgggcctctacggcgtcgccaccatgttc
atcgccgtcctcgacgccctggccgccggcgtcgtcgaccccgccgacctcccccgcaat
ctgaccaagggaatcgcagccggcagctccgtaccggaggctcttatgcgccgcctctat
gcaaccctcggcctgcgcgacctcgtcatctgctacggccagacggagacgagccccgtc
agctgcatgacgcagccagacgaccccctcggactgcgcaccacgaccgtcggccgcgcc
atgccccacaccgccgtcaaggttgttgaccccctcgaccgctcgcgcatcctgccgcga
ggcgaaaagggcgagctcgccgccgccggctacctcgtcatgcgcggctactggggtgac
gccgcgcgcacggctgaggaccgcatcgacgagtcagacggccgcacctggatgtactcg
ggcgacgaggcgagcatggacgccaacggctacgtcgccatcaccggacgcatcaaggat
ctcatcatccgcggcggcgagaacatccaccccctcgaggtcgagaactgcctgctgcag
cacccgctcgtcagtgatgcgtccgtcgtcggcgtcccttgcgacaagctgggcgagaat
gttgccgcgtttgtcgtgcgcgccaaggcggggtcggcgggcggaaaaggaactcacgga
ggatga
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