KEGG   Verticillium alfalfae: VDBG_02383
Entry
VDBG_02383        CDS       T02227                                 
Name
(RefSeq) WD repeat-containing protein
  KO
K14855  ribosome assembly protein 4
Organism
val  Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:val00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:val03009]
    VDBG_02383
Ribosome biogenesis [BR:val03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    VDBG_02383
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st WDR55 ANAPC4_WD40 DSE1_N Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_RIG_2nd CFAP251_N Beta-prop_WDR19_1st ASA1 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_NOL10_N Beta-prop_IFT140_1st PAC11 Beta-prop_NUP159_NUP214 eIF2A Beta-prop_SPT8 NLE Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_WDR75_2nd Tricorn_2nd
Other DBs
NCBI-GeneID: 9532752
NCBI-ProteinID: XP_003008195
UniProt: C9SA61
LinkDB
AA seq 515 aa
MATILPPPSKRQRREELERTTIQQDVTAVAPGEDGSFKARFVDGDGKQLAEVIEVPLADA
SEKNLSLLVNTLLDKDREDYLPYRFRINIPNSEIIVDTWPANFLELLRSHGVTNPFETTV
TLTAEPQAVFKVQAVSRMAHRIPGHGQAILAAQFSPATSSRLATGSGDNSVRIWNTETGT
PQHTMTGHTGWTLCVAWSPDAKIIASGSMDKTIRLWDPEKGVARGGALTGHQKWITQIAW
QPYFLWTDDTPRLASASKDCTIRVWLANTGKTEHVLSGHRSSVTCVKWGGTNLIFSGSQD
KTIRAWDAAKGTLVQTFTAHAHWVNHIALSTDHVLRTGFFDHTPVPDTDEGKRAKAKERF
EKVAKVQGKIDERFISASDDFLLYLHSPSQGTKPVAKMNGHQKQVNHVTFSPDGNLVASA
GWDNHIKIWAARDGRFLATLRGHVGPVFQVAFSADSRLLVTCSRDTTLKVWSMSTFKLVR
DLPGHQDEVYAVDWAPDGKKVGSGGKDKAVRLWCN
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggccaccattctacccccgccctcgaaacgccagaggcgcgaagaactcgagcgaaca
acgatccagcaagacgtcacggctgtcgcgcctggcgaggatggctcgttcaaggctcgc
ttcgtcgacggcgacgggaaacagctcgccgaggtcattgaggttcccctcgccgacgcc
tcggagaagaacctcagtcttctcgtcaacacgctactagacaaggaccgcgaagattac
ctgccctaccgcttccgcatcaacattcccaactcggagatcatcgtcgacacgtggccc
gccaattttctcgagctcctccgcagccatggcgtcacgaacccgtttgagacgacggtc
acattgacggccgagccgcaggccgtcttcaaagtccaggccgtcagccgcatggcgcac
aggataccgggccacggccaggccatcctggcggcccagttcagtcccgccacgagctcg
cggctggcgacaggctcgggcgacaactcggtgcgcatatggaacacggagacgggcacg
ccgcagcacacgatgacgggccacacgggctggacgctctgcgtcgcgtggagtccggac
gctaagatcattgccagcggctccatggacaagacgatcaggttatgggatcccgagaag
ggtgtcgcgcgcggcggtgcgctgacgggccaccagaaatggatcacgcagatcgcttgg
cagccgtacttcctgtggacggacgacacgccgaggctcgcatcggcgagcaaggactgc
accattcgcgtctggctcgccaacacgggcaagacggagcatgttctctcgggccaccgc
tccagcgtgacctgcgtcaagtggggcggcacgaacctcatcttcagcggcagccaggac
aagacgatccgggcgtgggacgcggccaagggcacgctcgtccagacgttcacggcgcac
gcgcactgggtcaaccacattgcgctgtcgacggaccacgtgctgcggacgggcttcttc
gaccacacgcccgttcccgacaccgacgagggcaagagggccaaggcgaaggagcggttt
gaaaaggtggccaaggtccagggcaagattgacgagcgcttcatctcggcgtccgacgac
ttcctgctctacctccactcgccgtcgcagggcaccaagcccgtggccaagatgaacggc
caccagaagcaggtgaaccatgtcactttctcgccagacggaaacctcgttgcttcggcg
ggctgggacaaccacatcaagatctgggccgctcgggacggcaggtttttggccactctg
cgtggccacgtcgggcccgttttccaagttgccttctccgcggactcgcgcctcctcgtc
acctgctcccgagacaccaccctcaaggtgtggtccatgtctacctttaagctcgtccgt
gaccttcccggtcaccaagacgaggtttatgcagtggactgggcgcccgacggcaagaag
gtcggcagcggcggaaaggacaaggcggttcggctatggtgtaactag

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