Verticillium alfalfae: VDBG_02383
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Entry
VDBG_02383 CDS
T02227
Name
(RefSeq) WD repeat-containing protein
KO
K14855
ribosome assembly protein 4
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_02383
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VDBG_02383
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
WDR55
ANAPC4_WD40
DSE1_N
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_WDR19_1st
ASA1
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_NOL10_N
Beta-prop_IFT140_1st
PAC11
Beta-prop_NUP159_NUP214
eIF2A
Beta-prop_SPT8
NLE
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
9532752
NCBI-ProteinID:
XP_003008195
UniProt:
C9SA61
LinkDB
All DBs
AA seq
515 aa
AA seq
DB search
MATILPPPSKRQRREELERTTIQQDVTAVAPGEDGSFKARFVDGDGKQLAEVIEVPLADA
SEKNLSLLVNTLLDKDREDYLPYRFRINIPNSEIIVDTWPANFLELLRSHGVTNPFETTV
TLTAEPQAVFKVQAVSRMAHRIPGHGQAILAAQFSPATSSRLATGSGDNSVRIWNTETGT
PQHTMTGHTGWTLCVAWSPDAKIIASGSMDKTIRLWDPEKGVARGGALTGHQKWITQIAW
QPYFLWTDDTPRLASASKDCTIRVWLANTGKTEHVLSGHRSSVTCVKWGGTNLIFSGSQD
KTIRAWDAAKGTLVQTFTAHAHWVNHIALSTDHVLRTGFFDHTPVPDTDEGKRAKAKERF
EKVAKVQGKIDERFISASDDFLLYLHSPSQGTKPVAKMNGHQKQVNHVTFSPDGNLVASA
GWDNHIKIWAARDGRFLATLRGHVGPVFQVAFSADSRLLVTCSRDTTLKVWSMSTFKLVR
DLPGHQDEVYAVDWAPDGKKVGSGGKDKAVRLWCN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccaccattctacccccgccctcgaaacgccagaggcgcgaagaactcgagcgaaca
acgatccagcaagacgtcacggctgtcgcgcctggcgaggatggctcgttcaaggctcgc
ttcgtcgacggcgacgggaaacagctcgccgaggtcattgaggttcccctcgccgacgcc
tcggagaagaacctcagtcttctcgtcaacacgctactagacaaggaccgcgaagattac
ctgccctaccgcttccgcatcaacattcccaactcggagatcatcgtcgacacgtggccc
gccaattttctcgagctcctccgcagccatggcgtcacgaacccgtttgagacgacggtc
acattgacggccgagccgcaggccgtcttcaaagtccaggccgtcagccgcatggcgcac
aggataccgggccacggccaggccatcctggcggcccagttcagtcccgccacgagctcg
cggctggcgacaggctcgggcgacaactcggtgcgcatatggaacacggagacgggcacg
ccgcagcacacgatgacgggccacacgggctggacgctctgcgtcgcgtggagtccggac
gctaagatcattgccagcggctccatggacaagacgatcaggttatgggatcccgagaag
ggtgtcgcgcgcggcggtgcgctgacgggccaccagaaatggatcacgcagatcgcttgg
cagccgtacttcctgtggacggacgacacgccgaggctcgcatcggcgagcaaggactgc
accattcgcgtctggctcgccaacacgggcaagacggagcatgttctctcgggccaccgc
tccagcgtgacctgcgtcaagtggggcggcacgaacctcatcttcagcggcagccaggac
aagacgatccgggcgtgggacgcggccaagggcacgctcgtccagacgttcacggcgcac
gcgcactgggtcaaccacattgcgctgtcgacggaccacgtgctgcggacgggcttcttc
gaccacacgcccgttcccgacaccgacgagggcaagagggccaaggcgaaggagcggttt
gaaaaggtggccaaggtccagggcaagattgacgagcgcttcatctcggcgtccgacgac
ttcctgctctacctccactcgccgtcgcagggcaccaagcccgtggccaagatgaacggc
caccagaagcaggtgaaccatgtcactttctcgccagacggaaacctcgttgcttcggcg
ggctgggacaaccacatcaagatctgggccgctcgggacggcaggtttttggccactctg
cgtggccacgtcgggcccgttttccaagttgccttctccgcggactcgcgcctcctcgtc
acctgctcccgagacaccaccctcaaggtgtggtccatgtctacctttaagctcgtccgt
gaccttcccggtcaccaagacgaggtttatgcagtggactgggcgcccgacggcaagaag
gtcggcagcggcggaaaggacaaggcggttcggctatggtgtaactag
DBGET
integrated database retrieval system